Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01845 ATGCCACCTTTCTGCAACCAAAAATCCACAACCCTCTCCGGAGTTATACCAGTTCTCTATATACAACCCATTCACATATATTCCTCGTGGATCAAAATAACACACAGACATATTATAGCAATGGTTGCGCCTTGTCCAACTTCCATGATGGTAAGAAGCAAGAAAACAAAGGGTATGGGAGTTCCGACGATCGACCTTTCATTGGAGAGGTCGAAGCTGTCGGAAATAGTGGTGAAAGCATGTGAAGAATATGGTTTCTTCAAGGTGGTGAAGCACAGTGTGGCGAAGGAGGTGATTTCAAGGTTGGAAGAGGAGGGAACGGCGTTTTTCTCGAAAAGCTCCTCCGAGAAGCGTCAAGCTGGCCCTGCAAATCCTTTTGGCTATGGCTGCAGAAATATTGGCCCCAATGGCGATATGGGTCACCTCGAGTATCTTCTCCTTCATACCAATCCTCTTTCCGTATCTGAGAGATCCCAAACCATAGCCAACGACCCTACCAAGTTCAGTTGCGCCGTAAATGATTATATAGAAGCAGCTAAAGGACTAACATGTGAGATTCTTGATCTTGTGGCGGAGGGTCTGTGGGTCCAAGACAAGTTCTTACTCAGCAACCTCATCAAAGACGTCCACAGTGACTCACTCCTCAGGATCAATCAGTACCCTCCCGTGAGCCTAAACGGCAACAAGAACAGGGACACCTCCAAACTTGAGCCACATCACCTCCACAACCAAAATAATAATAATAATAATAACAACACCACCAACAACATTGGTTTCGGAGAGCATTCTGACCCTCAGATCTTGACCATCATGCGATCCAACAACGTGGACGGCCTTCAGATTTCCACCCACGATGGCTTGTGGATCCCTGTCCCCCCTGACCCTAATCACTTCTTCGTTATGGTTGGTGATGCCCTCCAGGTTTTGACAAATGGAAGGTTTAGAAGCGTGAGACACAGAGTATTGACCAACGCGACCAAAGCCAGAATGTCGATGATGTACTTCGCAGCACCACCGCTGAATTGGTGGATCACTCCACTGCCCAAGATGGTGACACCGCACAATCCAACTCTCTATAAGCCCTTCACCTGGGCCCAATACAAACAAGCAGCATACTCTCTACGATTGGGAGACACTCGCCTTGATCTCTTCAAGATCCAACGACAACAAGATACCCATCTCGCTTCTGCTTCTCCCTGA 1200 0.475 MPPFCNQKSTTLSGVIPVLYIQPIHIYSSWIKITHRHIIAMVAPCPTSMMVRSKKTKGMGVPTIDLSLERSKLSEIVVKACEEYGFFKVVKHSVAKEVISRLEEEGTAFFSKSSSEKRQAGPANPFGYGCRNIGPNGDMGHLEYLLLHTNPLSVSERSQTIANDPTKFSCAVNDYIEAAKGLTCEILDLVAEGLWVQDKFLLSNLIKDVHSDSLLRINQYPPVSLNGNKNRDTSKLEPHHLHNQNNNNNNNNTTNNIGFGEHSDPQILTIMRSNNVDGLQISTHDGLWIPVPPDPNHFFVMVGDALQVLTNGRFRSVRHRVLTNATKARMSMMYFAAPPLNWWITPLPKMVTPHNPTLYKPFTWAQYKQAAYSLRLGDTRLDLFKIQRQQDTHLASASP 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01845 399 MobiDBLite consensus disorder prediction 225 259 - -
Viun7g01845 399 Pfam non-haem dioxygenase in morphine synthesis N-terminal 61 125 IPR026992 -
Viun7g01845 399 MobiDBLite consensus disorder prediction 240 259 - -
Viun7g01845 399 Gene3D - 32 375 IPR027443 -
Viun7g01845 399 FunFam Gibberellin 2-beta-dioxygenase 2 44 375 - -
Viun7g01845 399 Pfam 2OG-Fe(II) oxygenase superfamily 239 337 IPR044861 -
Viun7g01845 399 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 210 346 IPR005123 -
Viun7g01845 399 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 61 370 - -
Viun7g01845 399 PRINTS Isopenicillin N synthase signature 77 94 - -
Viun7g01845 399 PRINTS Isopenicillin N synthase signature 298 324 - -
Viun7g01845 399 PRINTS Isopenicillin N synthase signature 262 283 - -
Viun7g01845 399 SUPERFAMILY Clavaminate synthase-like 44 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01845 Viun-Chr7 23559956 23563600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01845 52 386 Glycosyltransferase AT5G59530 24.784 3.98e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01845 K04125 - gmx:100779525 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01845 7 23559956 23563600 Viun7g01845 7 23559956 23563600 ECH
Viun1g02853 1 37580747 37585116 Viun7g01845 7 23559956 23563600 PCT