Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02853 ATGGTTGTGGCTTCTCCAACATTCAGCAAGATAAGTTCCAATAATACAAAGGCAATGAGAATCCCAACCATTGACCTATCCATGGAAAGGTCACAGTTATCGCAAACTGTGGTGAAAGCCTGCGAGGAATACGGTTTCTTCAGAGTGGTTAACCACAATGTGCCGAAGGAGGTTATTGCCAGATTGGAAGAGGAAGGTGCAGAGTTTTTCTCAAAATCCAGTCACGAGAAGCGTCGGGCTGGGCCCGCGAGCCCATTCGGTTACGGCTTCACCAATATTGGGCCCAATGGAGATATGGGTGACCTGGAGTATCTTCTGCTTCGTGCTAACCCTCTCTCCATCGCTCAGATATCCAAAACCATCGCTAACGACTCCACCAAGTTCAGTACGGTGGTGAAGGAATACGTGGAAGTGGTAAAAGAAGTAACGTGCGAGATTCTAGATCTGGTGGTTGAGGGATTAGGGGTCGGAGACAAGTTTGGTCTTAGCCGTCTCATCAGAGATTATGATAGTGATTCTGTTCTAAGGATGAATCACTACCCTCCAATGAAGGTGAAGCGGAAGGGTAAGAAGAATAGCATTGGTTTTGGGGCGCATTCTGACCCTCAGATGTTGACCATCATGCGCTCCAACGATGTGGGTGGCCTTCAAATTTACACCCGTGACGGACTATGGCTTCCTGTCCCTCCTGATCCCACTAATTTCTTTGTCATGGTTGGCGATGTCTTGCAGGTTATGACAAATGGAAAGTTCATGAGCGTGAGGCACAGGGCATTGACGAACACATTGGAGGCAAGGATGTCAATGATGTACTTTGCAGCGCCGCCACTTGATTGGTGGATTGCTCCTCTACCGGAGATGGTGTCGCCACCAGAAAATGAAAGTGTGTATAAGGGCTTCACATGGGCCCAGTACAAGGAAGCAACATATTCTTTACGCCTTGGGGATTCACGACTTGATCTCTTCAAGGCCCACTTAGATACCCATCTTCTCTCTTCCTCTCAATCTCAGTTTCAATGTTGA 1023 0.478 MVVASPTFSKISSNNTKAMRIPTIDLSMERSQLSQTVVKACEEYGFFRVVNHNVPKEVIARLEEEGAEFFSKSSHEKRRAGPASPFGYGFTNIGPNGDMGDLEYLLLRANPLSIAQISKTIANDSTKFSTVVKEYVEVVKEVTCEILDLVVEGLGVGDKFGLSRLIRDYDSDSVLRMNHYPPMKVKRKGKKNSIGFGAHSDPQMLTIMRSNDVGGLQIYTRDGLWLPVPPDPTNFFVMVGDVLQVMTNGKFMSVRHRALTNTLEARMSMMYFAAPPLDWWIAPLPEMVSPPENESVYKGFTWAQYKEATYSLRLGDSRLDLFKAHLDTHLLSSSQSQFQC 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02853 340 FunFam Gibberellin 2-beta-dioxygenase 2 4 313 - -
Viun1g02853 340 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 21 308 - -
Viun1g02853 340 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 275 IPR005123 -
Viun1g02853 340 Pfam 2OG-Fe(II) oxygenase superfamily 172 274 IPR044861 -
Viun1g02853 340 Gene3D - 3 313 IPR027443 -
Viun1g02853 340 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 94 IPR026992 -
Viun1g02853 340 SUPERFAMILY Clavaminate synthase-like 12 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02853 Viun-Chr1 37580747 37585116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02853 19 323 Glycosyltransferase AT5G59530 27.607 2.30e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02853 K04125 - gmx:100777233 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02853 1 37580747 37585116 Viun1g02853 1 37580747 37585116 ECH
Viun1g02853 1 37580747 37585116 Viun7g01845 7 23559956 23563600 PCT