Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01794 ATGGCTTCAGTCTTTTCACCTCTCACCACTATCTTCTTCCTGATAGTGCTCTGGGGTGGCGAGGCACGCGAGCCTTTTGCGTGTGACCCAAAGAACGCCGCCACAAGGGGCTTACCCTTTTGCAAGGCGTCGGCGGCAATAGCGGAGAGGGTGAAGGACCTGATTGGAAGGTTGACGGTGGAAGAAAAAGTGAGCTTGCTGGTGAACAATGCGGCGGCAGTTCCACGGCTTGGAATCAAAGGCTATGAGTGGTGGTCGGAGGCACTGCATGGGGTCTCAAATGTCGGCCCCGGAACCAAGTTTGGCGGCCAGTTCCCCGCCGCCACCAGCTTCCCTCAAGTCATCACCACCGCTGCTTCTTTCAATGCTTCTTTGTGGGAAGCTATTGGACAGGTGGCCTCCGACGAAGCAAGAGCAATGTACAACGGAGGAACGGGTGGGCTTACATACTGGAGCCCAAACGTCAACATTTTCAGAGACCCACGGTGGGGCCGCGGACAGGAGACTCCCGGTGAGGATCCATTACTAGCCGGTAAGTATGCGGCCAGTTACGTGAGGGGATTACAGGGGAACGACGGTAACCGGTTGAAGGTGGCTGCTTCTTGCAAACACTTTACGGCTTATGACCTTGATAATTGGAACGGTGTGGATCGCTTTCACTTCAACGCAGAGGTTAGCAAGCAGGATATGAAGGACACGTTCAACGTCCCATTCAGGATGTGCGTTAAGGAAGGAAACGTGGCCAGTGTCATGTGTTCTTACAATCAGGTTAACGGCGTTCCTACCTGTGCCGATCCCGTTCTCCTAAAGACTACCGTTCGAGGCCTCTGGGGTCTTAATGGCTACATTGTATCGGACTGTGACTCCGTTGGGGTCTTTTACAATAGCCAACATTACACGTCTACGCCAGAAGAAGCTGCTGCCGATGCCATTAAAGCAGGTTTGGATTTGGATTGTGGCCCTTTTCTAGCCCAACACACCAACAACGCTGTCAAAAAAGGCCTCTTAACTGAAGCCCATGTCAATGGGGCCTTGGCGAACACGTTAACGGTCCAAATGAGGTTAGGGATGTATGACGGTGAGCCATCGGGCCATCCGTATGGCAATCTTGGCCCAAGAGATGTGTGCACCCCAAGTCACCAACACCTTGCCCTTCAAGCCGCCACACAAGGGATTGTTCTACTTAAAAACAAAGGCCCTTCTTTGCCTCTCTCCACAAGGCGTTACCGCACCCTCGCTCTTATTGGGCCCAATTCTAATGCCACTGTCACAATGATCGGAAACTATGCAGGTATTGCTTGCGGATACACCAGCCCTTTGCAGGGAATAGGAAAATATACCAAGACTATTCACGAGCCGGGTTGTGCAAATGTGGCCTGCAGAGACAACAAGCAATTCGGGAAAGCTATAAATGCAGCCCAACAAGCGGATGCAACTGTGCTGGTGATGGGCCTGGATCAGTCCATGGAGGCTGAAACTGTGGACAGGGCTGGCCTGCTTCTTCCTGGTCACCAACAAGACCTTGTGTCCCAAGTAGCATCTGCCTCCAAGGGCCCAACGATTTTGGTCATAATGTCTGGTGGGCCTGTGGATATAACTTTCGCAAAGAATGACCCTAGAATCCAGGGAATTTTGTGGGCCGGTTATCCGGGCCAAGCCGGTGGTGCTGCGATTGCAGATATCTTGTTTGGAACATCTAACCCTGGAGGCAAGCTACCTATGACATGGTACCCAGAAGGGTACGTTGAAAAGTTGGCAATGACAAATATGGCAATGCGATCAAGCAAAAGAAAAGGTTACCCAGGAAGAACCTACAGATTTTACAGTGGCCCAGTGGTGTATCCATTCGGTTACGGTTTGTCTTACACGCATTTTGTTCACACATTGGCAAGTGCACCCAAAGTGGTATCAATTCCCGTGGATGGGCACCGTCACAGGAATAGCTCCTCCAACATTGCAAACAAGGCAATTAAAGTGACACATGCACGATGTGGCAAGCTTTCTGTTAGCCTTCACGTGGACGTTAAAAATGTTGGATCCAGAGATGGCACGCACACGTTGCTAGTGTTCTCCGCACCACCTGCTGGAAAGGGCCACTGGGCTCCACTTAAGCAACTTGTGGGCTTCCACAAAGTCCACCTTCCCCCCAAGGCCCAACAACGGGTGCGGATCAACATTCACGTTTGCAAGCTCCTCAGCGTCGTTGACACCTCCGGGACTCGGAGAATTCCAATGGGCTCTCACACTCTTCACATTGCAGATATTAAACACTCTCTCGCACTTCACCCACAAACACTTGGAATTATCAAGACTTGA 2316 0.5151 MASVFSPLTTIFFLIVLWGGEAREPFACDPKNAATRGLPFCKASAAIAERVKDLIGRLTVEEKVSLLVNNAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGQFPAATSFPQVITTAASFNASLWEAIGQVASDEARAMYNGGTGGLTYWSPNVNIFRDPRWGRGQETPGEDPLLAGKYAASYVRGLQGNDGNRLKVAASCKHFTAYDLDNWNGVDRFHFNAEVSKQDMKDTFNVPFRMCVKEGNVASVMCSYNQVNGVPTCADPVLLKTTVRGLWGLNGYIVSDCDSVGVFYNSQHYTSTPEEAAADAIKAGLDLDCGPFLAQHTNNAVKKGLLTEAHVNGALANTLTVQMRLGMYDGEPSGHPYGNLGPRDVCTPSHQHLALQAATQGIVLLKNKGPSLPLSTRRYRTLALIGPNSNATVTMIGNYAGIACGYTSPLQGIGKYTKTIHEPGCANVACRDNKQFGKAINAAQQADATVLVMGLDQSMEAETVDRAGLLLPGHQQDLVSQVASASKGPTILVIMSGGPVDITFAKNDPRIQGILWAGYPGQAGGAAIADILFGTSNPGGKLPMTWYPEGYVEKLAMTNMAMRSSKRKGYPGRTYRFYSGPVVYPFGYGLSYTHFVHTLASAPKVVSIPVDGHRHRNSSSNIANKAIKVTHARCGKLSVSLHVDVKNVGSRDGTHTLLVFSAPPAGKGHWAPLKQLVGFHKVHLPPKAQQRVRINIHVCKLLSVVDTSGTRRIPMGSHTLHIADIKHSLALHPQTLGIIKT 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01794 771 FunFam probable beta-D-xylosidase 7 50 364 - -
Viun7g01794 771 Pfam Fibronectin type III-like domain 687 753 IPR026891 -
Viun7g01794 771 PANTHER SUGAR HYDROLASE-RELATED 22 757 IPR044993 GO:0009044|GO:0045493
Viun7g01794 771 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 392 625 IPR036881 GO:0004553|GO:0005975
Viun7g01794 771 Gene3D Immunoglobulins 646 767 IPR013783 -
Viun7g01794 771 Pfam Glycosyl hydrolase family 3 C-terminal domain 392 622 IPR002772 GO:0004553|GO:0005975
Viun7g01794 771 Pfam Glycosyl hydrolase family 3 N terminal domain 104 349 IPR001764 GO:0004553|GO:0005975
Viun7g01794 771 Gene3D - 50 364 IPR036962 GO:0004553|GO:0005975
Viun7g01794 771 FunFam probable beta-D-xylosidase 2 377 623 - -
Viun7g01794 771 SMART Fn3_like_2 685 756 IPR026891 -
Viun7g01794 771 SUPERFAMILY (Trans)glycosidases 38 391 IPR017853 -
Viun7g01794 771 Gene3D - 378 623 IPR036881 GO:0004553|GO:0005975
Viun7g01794 771 PRINTS Glycosyl hydrolase family 3 signature 111 130 IPR001764 GO:0004553|GO:0005975
Viun7g01794 771 PRINTS Glycosyl hydrolase family 3 signature 198 214 IPR001764 GO:0004553|GO:0005975
Viun7g01794 771 PRINTS Glycosyl hydrolase family 3 signature 272 290 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01794 Viun-Chr7 23048287 23052381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01794 8 771 Glycoside Hydrolase AT1G02640 71.186 0.0 1148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01794 - - gmx:100798630 1412.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01794 7 23048287 23052381 Viun7g01794 7 23048287 23052381 ECH
Viun1g02804 1 37320435 37325216 Viun7g01794 7 23048287 23052381 PCT