Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02804 ATGTCTTCAACCTTCTCACCTCTAGTTGCTGTCTTTCTCCTCCTCTTTCTTCTCCGCTACACGTGTGAGGCACGTGAAGCATTCGCCTGCGACCCTAAAAATGCCGCCACCAAGAACTTACCGTTTTGCAAGGTCTCTGTGGCGATATCGGAGAGGGTGAAAGACCTTATCGGGAGGTTGACGCTTGAGGAGAAGGTTAGGCTTCTGGTGAACAATGCCGCGGCGGTTCCGCGGTTGGGGATGAAAGGGTACGAGTGGTGGTCGGAGGCACTGCACGGCGTTTCAAATGTGGGTCCTGGAGTCAAGTTTAATGCAGAATTCCCCGGCTCAACTAGTTTTCCCCAAGTCATCACCACCGCTGCTTCCTTCAACGTTTCACTCTGGGAGTCAATCGGACGGGTTGTATCCGATGAGGCAAGGGCCATGTACAACGGTGGAACAGCAGGTCTCACCTATTGGAGCCCAAATGTTAACATTTTCAGGGACCCAAGGTGGGGCCGCGGACAGGAAACTCCCGGTGAGGACCCTGTGCTAGCCGGTATCTACGCTGCCAGTTACGTTAGAGGACTACAGGGAAACCACCCTAACCGGTTGAAGGTTGCAGCGTGTTGCAAACACTTCACGGCTTATGACCTCGATAATTGGAACGGCATGGATCGCTTCCACTTCAATGCACAGGTAAGTAAACAGGACATAGAGGATACATTCGACGTGCCATTCAGGATGTGTGTGAGCGAAGGGAAAGTAGCGAGCGTGATGTGTTCTTATAATCAAGTGAATGGGGTTCCAACTTGTGCGGACCCCAACCTCCTCAAGAACACACTTCGTGGCCTGTGGCAACTAGACGGGTACATTGTATCAGACTGTGACTCTGTTGGGGTGTTTTATAGTAATCAACATTATGCCCACCCAGAAGAAGCTGCTGCTGATGCCATTAAAGCAGGTTTGGATTTAGACTGTGGTCCCTTCCTGGCCGTGCACACGCAGGATGCTGTGAAAAAAGGCTTGCTAAGCGAAGCTGACGTGGACGGGGCCCTGGTTAATACACTAACGGTCCAGATGAGGTTAGGGATGTTTGATGGAGAGCCATCGGCCCAAGAATATGGTAAATTGGGCCCAAATGACGTGTGCAAACCGGCCCATCAACAGCTAGCTCTTGAAGCTGCAACACAAGGAATTGTCCTTCTTAAAAACACTGGCCCCGTTTTGCCTCTCTCCCAACACCGTCATCGTACCGTGGCTGTCATCGGGCCCAATTCCAAGGCCACTGTTACAATGATTGGAAACTACGCTGGTATTGCTTGTGGATACACCAGCCCCTTACAAGGAATAGGAAGATATGCCAGGACTATTCATCAGTTGGGTTGTGAAAACGTAGCTTGTAAGAATGACAACCTTTTCGGGCCCGCTATAAACGCAGCCCGTCAAGCGGATGCAACCGTTCTAGTTATGGGCCTGGACCAGTCCATCGAAGCTGAAACAGTGGACAGGACTGGCTTGCTTTTGCCGGGGCGTCAACAAGACCTCGTTTCAAAAGTGGCAGCTGCCTCAAAGGGACCAACCATTCTGGTCCTAATGTCTGGTGGGCCTGTTGACATCACTTTTGCGAAAAACAACCCTCGGATCGTGGGCATCCTCTGGGCCGGTTATCCTGGCCAAGCGGGCGGTGCCGCCATTGCAGATATAGTGTTTGGAACATCTAGCCCAGGGGGAAAGCTTCCGATGACGTGGTACCCAGAAGAATACCTGAGAAAGTTGCCGATGACGAAGATGGCAATGCGAGGAAGTGAATCAGCAGGGTACCCAGGAAGAACGTATAGGTTCTACAAGGGTGAAGTGGTGTATCCATTTGGGCACGGGCTAACTTACACTCACTTTGTTCACACACTGGCAAGTGCCCCCACAGTGGTGTCAGTTCCCGTGAACGGTCACCGGCGTTCGAATGGCAGCGACATTTCCAACAGAGCAATCAGAGTGACGCATGCGCGGTGCGACAACCTCTTCATCACCCTTCAGGTGGACGTTAAAAACGTGGGGTCGAGAGATGGGACACACACGTTGGTGGTGTTCTCTGCTCCACCTGCAGCTGGTGGGCATTGGGCACTGGAGAAGCAACTCGTGGCCTTCCACAAAGTCCATGTTCCTGCGAAGGCTCAACACAGAGTTGGAGTCCATATTCACGTCTGCAAGCTCCTGAGTATAGTGGATAAGTCTGGGATCAGGAGAATCCCGTTGGGCCTACACAGTTTTAACATCGGTGACGTTAAACATTCCGTCTCACTTCAAGCTGCAGCACTCGGGATCATCAAGTCCTGA 2316 0.5194 MSSTFSPLVAVFLLLFLLRYTCEAREAFACDPKNAATKNLPFCKVSVAISERVKDLIGRLTLEEKVRLLVNNAAAVPRLGMKGYEWWSEALHGVSNVGPGVKFNAEFPGSTSFPQVITTAASFNVSLWESIGRVVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGIYAASYVRGLQGNHPNRLKVAACCKHFTAYDLDNWNGMDRFHFNAQVSKQDIEDTFDVPFRMCVSEGKVASVMCSYNQVNGVPTCADPNLLKNTLRGLWQLDGYIVSDCDSVGVFYSNQHYAXHPEEAAADAIKAGLDLDCGPFLAVHTQDAVKKGLLSEADVDGALVNTLTVQMRLGMFDGEPSAQEYGKLGPNDVCKPAHQQLALEAATQGIVLLKNTGPVLPLSQHRHRTVAVIGPNSKATVTMIGNYAGIACGYTSPLQGIGRYARTIHQLGCENVACKNDNLFGPAINAARQADATVLVMGLDQSIEAETVDRTGLLLPGRQQDLVSKVAAASKGPTILVLMSGGPVDITFAKNNPRIVGILWAGYPGQAGGAAIADIVFGTSSPGGKLPMTWYPEEYLRKLPMTKMAMRGSESAGYPGRTYRFYKGEVVYPFGHGLTYTHFVHTLASAPTVVSVPVNGHRRSNGSDISNRAIRVTHARCDNLFITLQVDVKNVGSRDGTHTLVVFSAPPAAGGHWALEKQLVAFHKVHVPAKAQHRVGVHIHVCKLLSIVDKSGIRRIPLGLHSFNIGDVKHSVSLQAAALGIIKS 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02804 772 FunFam probable beta-D-xylosidase 2 379 625 - -
Viun1g02804 772 PANTHER SUGAR HYDROLASE-RELATED 23 760 IPR044993 GO:0009044|GO:0045493
Viun1g02804 772 Pfam Glycosyl hydrolase family 3 C-terminal domain 394 624 IPR002772 GO:0004553|GO:0005975
Viun1g02804 772 FunFam probable beta-D-xylosidase 7 52 366 - -
Viun1g02804 772 Pfam Glycosyl hydrolase family 3 N terminal domain 109 349 IPR001764 GO:0004553|GO:0005975
Viun1g02804 772 Gene3D - 379 625 IPR036881 GO:0004553|GO:0005975
Viun1g02804 772 Gene3D Immunoglobulins 649 768 IPR013783 -
Viun1g02804 772 Gene3D - 52 370 IPR036962 GO:0004553|GO:0005975
Viun1g02804 772 SUPERFAMILY (Trans)glycosidases 40 393 IPR017853 -
Viun1g02804 772 PRINTS Glycosyl hydrolase family 3 signature 274 292 IPR001764 GO:0004553|GO:0005975
Viun1g02804 772 PRINTS Glycosyl hydrolase family 3 signature 113 132 IPR001764 GO:0004553|GO:0005975
Viun1g02804 772 PRINTS Glycosyl hydrolase family 3 signature 200 216 IPR001764 GO:0004553|GO:0005975
Viun1g02804 772 SMART Fn3_like_2 686 757 IPR026891 -
Viun1g02804 772 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 394 627 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02804 Viun-Chr1 37320435 37325216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02804 9 772 Glycoside Hydrolase AT1G02640 72.382 0.0 1150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02804 - - gmx:100809501 1422.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02804 1 37320435 37325216 Viun1g02804 1 37320435 37325216 ECH
Viun1g02804 1 37320435 37325216 Viun7g01794 7 23048287 23052381 PCT