Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01785 ATGGAGGCTGTGTGTTTAAAATCTGGGATGCTTCCCACGATCTCTATTGGTGGGTCGCTGGACGCACGTGCCAATCCTTCTCAGGTGAGCACGGTGGGGCGTTCCGCTGGGGATAAACCGCCGCAAAGGTCGTTGTTTTCGAGGTTTTCCTTTCGGTATCCTTTGGAATCTCTCTGGCATCGGGGGAACAACAGCAAGCACAAAGGGCTCGCCCTTGACGACGCCGTTTTGGCGGATAACACGGAAGCGAAGGCCGTTAGGGATGACGGCGAGGGTGACGGAACGGAACGCGGAAACTGGGTTTTGAAGATTTTGCGCGTGAAGTCCGTGTGGGAGGGGAAACAGCGCGATGAAGAGGAGGTCGCGGTTAATGATCAGACTCAATGCAATTACGACGGGGAGGAACTGTGTGAATGCGATGCTTGCGGAGTTGGGGAAGATGACGGATACGGTGACGCAGAAGAGGCTGAATTCGATAGAGGCTCCTTTTCCAGAATGCTCCGAAGGGTATCGTTAGCCGAAGCTAGGTTGTATGCTCAGATGTCACACTTGGGGAACTTGGCTTACGATATACCGAAAATCAAGCCCGGGAAACTCTTAAAACATTATGGTTTGCGCCTTGTAACTTCATCAATAGAGAAGAAGGAATTGGCAGCAATAGCTGAAAAAGATACCCAGAAAGTTGAAACTGACGAGAAGGAAGAAGAGGAAAAAGAAGAAGGAAAAAGAGAGGATCCGAAGCACAGTGGGTACAACATAAGTGCAACTGCTGCTTATAACATTGCCGCCTCTGCTGCCACATATCTGCATTCTCAGACTAGGAGCATATTTCCATTCAAATCCTCAAATGCAGTGACTGGTGAAGCTTCACTTGATGGAAGCAATGAGAGCCTAGACAGTAACTTAATAAACTCAGAGGTGTCATCTTTGATGGCCACAACCGATTCAGTGACAGCAGTGGTTGCGGCAAAGGAGGAAGTAAAGCAGGCTGTCGCTGATGATTTAAACTCTGCACATTCATCACCTTGTGAATGGTTTGTCTGTGATGATGACGAGAGTGGTGCAAGATTCTTTGTTATTCAGGGTTCAGAGACAATGGCTTCTTGGCAAGCAAACCTGCTTTTTGAACCGATTAAATTTGAGGGGTTAGACGTTCTTGTGCACAGAGGTATATACGAGGCTGCTAAAGGGATGTATGAGCAGATGTTGCCAGAAGTACATGCTCATCTAAAATCTCGAGGTTCTCGTGCAACTTTTCGTTTCACTGGGCATTCTCTTGGTGGAAGCCTGGCATTACTAGTAAATCTCATGCTGTTGATTAGGCAGGAAGTGCCTGTGTCCTCTCTACTTCCCGTGGTAACATTTGGTTCTCCATCCATCATGTGTGGTGGGGATAGTCTGCTAGAAAAATTAGGTTTGCCTAGGAGTCATGTTCAAGCAATTACAATGCACAGAGACATTGTTCCTCGAGCATTTTCTTGCAATTACCCTAACCACGTTGCAGAACTGTTGAAGGCTGTCAATGGGAACTTCCGTAGTCATCCTTGTCTCAATAAACAGAAGGTACTATATACACCAATGGGTAATCTACTGATTCTGCAGCCAGATGAGAAATTTTCACCAAGCCATCATCTCCTGCCTTCAGGCAGTGGTCTATATCTTTTGTGTTGCCCTTTGTCAGAATCCAAGGACACAGACAAGCAGCTCCGAGCTGCTCAGACGGTGTTCTTGAACTCACCCCACCCACTTGAGATATTAAGTGACCGTTCTGCTTATGGATCCGGAGGAAGTATCCAAAGAGATCATGACATGAACTCCTACTTAAAGTGTGTGAGAACTGTGATTCGCCAGGAACTTAACCAGATCCGTAAGGTCAAGAGGGAGCAACGACGGAAGGTGTGGTGGCCTCTTGTGTTAGCACGTGGAATGGATACCAGCATTGGTGCTGGAAGGTCCATGATATCAATCAACGTAGGCCAACGCCAGTCACCCTTCTCTGGCATGATACAAACAGGGAGACAGTCCCTGAAAAGGTTCAAGAGGCTTGTTACATCCCAGCATATTCATTTGTTTGTGCTGTTCTTGTTCCCTGCCCGCTTGTTACTCTTGGGAACATACAGCCTAATTAGCCTTACATGA 2139 0.4731 MEAVCLKSGMLPTISIGGSLDARANPSQVSTVGRSAGDKPPQRSLFSRFSFRYPLESLWHRGNNSKHKGLALDDAVLADNTEAKAVRDDGEGDGTERGNWVLKILRVKSVWEGKQRDEEEVAVNDQTQCNYDGEELCECDACGVGEDDGYGDAEEAEFDRGSFSRMLRRVSLAEARLYAQMSHLGNLAYDIPKIKPGKLLKHYGLRLVTSSIEKKELAAIAEKDTQKVETDEKEEEEKEEGKREDPKHSGYNISATAAYNIAASAATYLHSQTRSIFPFKSSNAVTGEASLDGSNESLDSNLINSEVSSLMATTDSVTAVVAAKEEVKQAVADDLNSAHSSPCEWFVCDDDESGARFFVIQGSETMASWQANLLFEPIKFEGLDVLVHRGIYEAAKGMYEQMLPEVHAHLKSRGSRATFRFTGHSLGGSLALLVNLMLLIRQEVPVSSLLPVVTFGSPSIMCGGDSLLEKLGLPRSHVQAITMHRDIVPRAFSCNYPNHVAELLKAVNGNFRSHPCLNKQKVLYTPMGNLLILQPDEKFSPSHHLLPSGSGLYLLCCPLSESKDTDKQLRAAQTVFLNSPHPLEILSDRSAYGSGGSIQRDHDMNSYLKCVRTVIRQELNQIRKVKREQRRKVWWPLVLARGMDTSIGAGRSMISINVGQRQSPFSGMIQTGRQSLKRFKRLVTSQHIHLFVLFLFPARLLLLGTYSLISLT 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01785 712 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 26 701 IPR043367 GO:0008970
Viun7g01785 712 Pfam Lipase (class 3) 358 495 IPR002921 GO:0006629
Viun7g01785 712 SUPERFAMILY alpha/beta-Hydrolases 340 530 IPR029058 -
Viun7g01785 712 MobiDBLite consensus disorder prediction 223 250 - -
Viun7g01785 712 MobiDBLite consensus disorder prediction 22 37 - -
Viun7g01785 712 MobiDBLite consensus disorder prediction 223 249 - -
Viun7g01785 712 Gene3D alpha/beta hydrolase 302 527 IPR029058 -
Viun7g01785 712 MobiDBLite consensus disorder prediction 22 41 - -
Viun7g01785 712 CDD Lipase_3 341 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01785 Viun-Chr7 22927737 22931257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01785 1 711 Acyl Lipid Metabolism Gene Families AT1G02660 56.233 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01785 - - gmx:100786628 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01785 7 22927737 22931257 Viun7g01785 7 22927737 22931257 ECH
Viun1g02801 1 37292183 37295754 Viun7g01785 7 22927737 22931257 PCT