Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02801 ATGGATGCTCTGTGTTTACACAGTAGCATCTGTAAGATAACTTCGATTACTGCAACTGCACGTGCCAATGATTACGCGTCGCACTCTCAGGTGAGCGCGCTGGGAGGCTCCTCCTTGTTTTCCAGATTCTCTTTTAGATACCCTTCCACGTCTTTATGTCCACAACAACTCACGGGGAATGCTGCCGGCAACAATGGCATGGCCGTCGACGACGCCGTTTTGGCAGATAATGAAACTGAAGAACGAGAGCGACAAAACGGGAATTGGGTTTTCAAGATGTTTCATGCAAGGTCTGTTCCCAGTGGGGAACAGAGAAACGACGAAAACGATGAAGACAAAGTTGTTGTAAATGTTCTAACGGATAAAGAAAAGGAGGAGGAAGAGTGTGATGGCTGTAGGGTTGATTACGACGACGAAGACAATGAAGACAAAGAACAAGAAGATGAAGAGATTTTGTTCGACAAAGACTCTTTTTCGAGAATGCTTCGGAAGGTGTCATTGACCGAAGCTAAATTATATGCACGCATATCCCACTTGGGCAATTTGGCATACTCTATCCCCAAAATCAAACCAGGGATGCTCTTCAAAAACCATGGTCTGCGTTTTGTAACTTCATCCATAGTGAAAAAGAAATTGGCTGTGGCAGCAGAAAAAAACCAGACATCGACTGCAATTCAGAAAGAAGAAACTAACGACGAGGATGATGTGGGAGAAACAAAAGAGAAAAAGAAGGGTGGATACGTGATAGGTGCATGTACTGCATACGAGACTGCTGCTTCTGCAGCCTCTTATCTCCATGCTCAAACAAAGAGCATACTTCCATTCACATCTTCCAATGCCGTGGAAGATGAAGAAGGTTCACATGAAGCAAGCAAAGAAAGCTTTAAAGGAAACAAGATGACAAACACGGAGGAAGAAGCAGCTCTGAAGGCAACTACTGATTCGGTAACAGCAGTTGTTGCTGCAAATGAGGATGTAAAACAGGCTTTTGCAGATGATTTGAGCTCGACAAGCTCTTCACCCTGTGAATGGTTCGCATGCGACGATGACGAGACTGCTACAAGATATTTTGTGATCCAGGGTTCCGAGTCATTTGCTTCCTGGAAAGCGAACCTACTATTTGAGCCAGTTAAATTCGAGGGTTTAGATGTCTATGTGCATAGAGGTATATACGAGGCTGCTAAAGGGACATATCAACAAATGTTACCAGAGATTCGTGCTCACCTAAAATCTCATGATTCCCGTGCAACTTTCCGTTTCACTGGACATTCTCTTGGTGGGAGTTTGGCATTACTCGTAAACCTTATGCTGTTAATAAGAAAAGAAGCACCATTTTCCTCTCTGCTTCCTGTGATAACATTTGGGGCCCCATCCATCATGTGTGGAGGTGATAGTCTTCTCGACAACCTAGGATTGCCACGGAGTCATGTTCAAGCAATCACAATGCACAGAGACATTGTACCACGAGCGTTTTCTTGCAAGTACCCTAACCACATTGCAGAACTGCTAAAGGCTGTTAATGGCAACTTCCGCAATCATCCCTGTCTTAATAACCAGAAGCTATTGTATGCACCAATGGGCGAGCTCTTGATCCTACAGCCAGATGAGAAATTTTCGCCAAGTCATCATCTTTTGCCCTCGGGCAGTGGCCTGTATCTTTTGAGTGGTCACTTGTCAGAATCTAGTGACTCATTGAAACAGATCCGGGCAGCGAAGATGGTGTTCTTGAACTCACCACACCCACTTGAGATATTAAGCGACCGATCTGCGTATGGATCTGGGGGAACCATTCAGAGAGATCACGACATGAATTCGTACTTGAGATGTGTGAGAAGCGTGCTTCGCCAAGAACTTCACAAGACTCGCAAGGCAAGGAGAGAGCAACGGCGGCGAAAGGTGTGGTGGCCTCTGGTGCTGCCACGTGGGAGTGAGAGTGCGGCGGTTGGAGGGTCCATGATATCGGTGAATATGATTCACGACGAACCTTCTCTCTTTGGCATGATCGAGAGTGGGAGAGAGTCGTTGAAAAGGTTCGGTAGTGTTGTTGCATCCCAACACATACAATTGTTTGTGGTGCTTTTGCTTCCTGCAAGGTTGTTACTGGTGGGAGCATGTAACTTAATTAGCTTAAGATGA 2136 0.4555 MDALCLHSSICKITSITATARANDYASHSQVSALGGSSLFSRFSFRYPSTSLCPQQLTGNAAGNNGMAVDDAVLADNETEERERQNGNWVFKMFHARSVPSGEQRNDENDEDKVVVNVLTDKEKEEEECDGCRVDYDDEDNEDKEQEDEEILFDKDSFSRMLRKVSLTEAKLYARISHLGNLAYSIPKIKPGMLFKNHGLRFVTSSIVKKKLAVAAEKNQTSTAIQKEETNDEDDVGETKEKKKGGYVIGACTAYETAASAASYLHAQTKSILPFTSSNAVEDEEGSHEASKESFKGNKMTNTEEEAALKATTDSVTAVVAANEDVKQAFADDLSSTSSSPCEWFACDDDETATRYFVIQGSESFASWKANLLFEPVKFEGLDVYVHRGIYEAAKGTYQQMLPEIRAHLKSHDSRATFRFTGHSLGGSLALLVNLMLLIRKEAPFSSLLPVITFGAPSIMCGGDSLLDNLGLPRSHVQAITMHRDIVPRAFSCKYPNHIAELLKAVNGNFRNHPCLNNQKLLYAPMGELLILQPDEKFSPSHHLLPSGSGLYLLSGHLSESSDSLKQIRAAKMVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYLRCVRSVLRQELHKTRKARREQRRRKVWWPLVLPRGSESAAVGGSMISVNMIHDEPSLFGMIESGRESLKRFGSVVASQHIQLFVVLLLPARLLLVGACNLISLR 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02801 711 CDD Lipase_3 311 489 - -
Viun1g02801 711 MobiDBLite consensus disorder prediction 282 297 - -
Viun1g02801 711 SUPERFAMILY alpha/beta-Hydrolases 339 524 IPR029058 -
Viun1g02801 711 Gene3D alpha/beta hydrolase 274 636 IPR029058 -
Viun1g02801 711 MobiDBLite consensus disorder prediction 278 297 - -
Viun1g02801 711 MobiDBLite consensus disorder prediction 220 240 - -
Viun1g02801 711 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 22 700 IPR043367 GO:0008970
Viun1g02801 711 Pfam Lipase (class 3) 357 493 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02801 Viun-Chr1 37292183 37295754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02801 1 711 Acyl Lipid Metabolism Gene Families AT1G02660 51.757 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02801 - - gmx:100788786 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02801 1 37292183 37295754 Viun1g02801 1 37292183 37295754 ECH
Viun1g02801 1 37292183 37295754 Viun7g01785 7 22927737 22931257 PCT