Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01674 ATGGAGTTGCTGGCATCTTTTTATGCTGAGAAGCCGGTGGTGATCTTCAGCAAGAGCACTTGCAGCATTTGCCATTCTGTGAAGGCTCTGATACGCAGCTTCGGTGCCAACCGTACAGATATAGAGGTTGACAAAATGGCAAATGGGGAGCAAATAGAAAGGGCACTGATTCAGCTGGGTTGTCGCCCAACTGTACCAGCAGTGTTCATTGGACAACGATTTATAGGTGGTGCTGATGAACTCATAAGGCTCAACGTCCAAAACCAGCTTGCCCAGTTGCTTTTAAGCGCTGGAGCTATATTTATTTGGAGCCCATAA 318 0.4717 MELLASFYAEKPVVIFSKSTCSICHSVKALIRSFGANRTDIEVDKMANGEQIERALIQLGCRPTVPAVFIGQRFIGGADELIRLNVQNQLAQLLLSAGAIFIWSP 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01674 105 Gene3D Glutaredoxin 2 101 - -
Viun7g01674 105 SUPERFAMILY Thioredoxin-like 2 100 IPR036249 -
Viun7g01674 105 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Viun7g01674 105 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Viun7g01674 105 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Viun7g01674 105 Pfam Glutaredoxin 13 75 IPR002109 -
Viun7g01674 105 CDD GRX_GRXh_1_2_like 12 93 - -
Viun7g01674 105 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Viun7g01674 105 PANTHER GLUTAREDOXIN 4 101 IPR011905 -
Viun7g01674 105 NCBIfam glutaredoxin-like family 7 101 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01674 Viun-Chr7 21636986 21637496 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01674 1 102 Miscellaneous Gene Families AT4G15700 45.098 1.15e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01674 K03676 - gmx:106794948 152.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01674 7 21636986 21637496 Viun7g01674 7 21636986 21637496 ECH
Viun1g02701 1 36722168 36724357 Viun7g01674 7 21636986 21637496 PCT
Viun7g01674 7 21636986 21637496 Viun1g02705 1 36742004 36742761 PCT