Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02705 ATGGACTTGAAACCATTGATTGCAGACAAGCCAGTGGTGATCTTCAGCAAGAGCAATTGCTGCATGAGCCACACAGTGAAGGCTCTGATATGCAGCTTTGGTGCCAACCATGCAGTTATTGAGATTGACAAAATGGTAAGTGGCCAACAAGTAGAGAGTGCACTTCTCCAGCTAGGTTGCCGCCCCAGTGTGCCTGCAGTGTTCATAGGACAAGAATTCATAGGTGGTGCTGATGAAGTATTCAAACTAAATGTTCAAAACAGGCTTTCCCAATTGCTGCTCAAGGCTAAAGCCATATTTCTCTGA 306 0.4542 MDLKPLIADKPVVIFSKSNCCMSHTVKALICSFGANHAVIEIDKMVSGQQVESALLQLGCRPSVPAVFIGQEFIGGADEVFKLNVQNRLSQLLLKAKAIFL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02705 101 CDD GRX_GRXh_1_2_like 11 92 - -
Viun1g02705 101 PRINTS Glutaredoxin signature 57 70 IPR014025 -
Viun1g02705 101 PRINTS Glutaredoxin signature 71 84 IPR014025 -
Viun1g02705 101 PRINTS Glutaredoxin signature 12 30 IPR014025 -
Viun1g02705 101 Gene3D Glutaredoxin 1 100 - -
Viun1g02705 101 Pfam Glutaredoxin 12 74 IPR002109 -
Viun1g02705 101 SUPERFAMILY Thioredoxin-like 4 98 IPR036249 -
Viun1g02705 101 PANTHER GLUTAREDOXIN 4 100 IPR011905 -
Viun1g02705 101 NCBIfam glutaredoxin-like family 5 100 IPR011905 -
Viun1g02705 101 ProSiteProfiles Glutaredoxin domain profile. 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02705 Viun-Chr1 36742004 36742761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02705 2 101 Miscellaneous Gene Families AT4G15690 47.000 2.96e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02705 K03676 - gmx:100803979 162.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01674 7 21636986 21637496 Viun1g02705 1 36742004 36742761 PCT