Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01672 ATGGATAGAGTAAGAGAGTTGGCATCAAAGAAAGCAGCAGTTATATTCACCAAGAGTTCATGTTACATGTGCCACAGCATCACGCAACTGTTCTATGAGCTTGGAGCAAGCCCTGCGGTGCATGAGCTTGACAAGGATGCGTATGGGAGGGAAATGGAGTGGGCTTTGAGGAGCATGGGGTGCAACCCTTCAGTGCCAGCAGTGTTCATTGGTGGCAAATTTGTAGGCTCATCAAAGGATGTCATATCCCTCCATGTTGATGGTTCCCTCAAACAAATGCTTATGGCTGCCAAGGCCATATGGTTTTAG 309 0.4757 MDRVRELASKKAAVIFTKSSCYMCHSITQLFYELGASPAVHELDKDAYGREMEWALRSMGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQMLMAAKAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01672 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Viun7g01672 102 Gene3D Glutaredoxin 1 101 - -
Viun7g01672 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Viun7g01672 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Viun7g01672 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Viun7g01672 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Viun7g01672 102 Pfam Glutaredoxin 14 75 IPR002109 -
Viun7g01672 102 CDD GRX_GRXh_1_2_like 12 93 - -
Viun7g01672 102 NCBIfam glutaredoxin-like family 4 101 IPR011905 -
Viun7g01672 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01672 Viun-Chr7 21600536 21601163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01672 1 102 Miscellaneous Gene Families AT4G15700 47.059 3.74e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01672 K03676 - gmx:100305876 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01672 7 21600536 21601163 Viun7g01672 7 21600536 21601163 ECH
Viun1g02700 1 36720951 36721722 Viun7g01672 7 21600536 21601163 PCT
Viun7g01672 7 21600536 21601163 Viun1g02701 1 36722168 36724357 PCT