Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02700 ATGGACAAGGTGAAGAGGTTGGCCTCTGAAAATGGTGTGGTGATTTTCACGAAGAGCTCTTGTTGCCTCTGCTACGCAGTTAACATTCTGTTTCAAGAACTTGGGGCGAATCCTCTGGTTTATGAGATTGATCATGACCCTGAAGGCAGAGAAATAGAGAAAGCTTTATTAAAGCTAGGGTGCAATGCTCCAGTCCCAGCTGTGTTCATCGCAGGGAAGCTAATTGGATCCACCAATGAAATCATGTCCCTCCACCTAAGCGGTTCACTCACTCGAATGCTGAAAGGCCAGCCTTTGTCTTGA 303 0.4653 MDKVKRLASENGVVIFTKSSCCLCYAVNILFQELGANPLVYEIDHDPEGREIEKALLKLGCNAPVPAVFIAGKLIGSTNEIMSLHLSGSLTRMLKGQPLS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02700 100 Gene3D Glutaredoxin 1 98 - -
Viun1g02700 100 PANTHER GLUTAREDOXIN 1 95 IPR011905 -
Viun1g02700 100 FunFam Glutaredoxin family protein 1 99 - -
Viun1g02700 100 NCBIfam glutaredoxin-like family 4 95 IPR011905 -
Viun1g02700 100 SUPERFAMILY Thioredoxin-like 1 96 IPR036249 -
Viun1g02700 100 ProSiteProfiles Glutaredoxin domain profile. 1 100 - -
Viun1g02700 100 Pfam Glutaredoxin 13 75 IPR002109 -
Viun1g02700 100 CDD GRX_GRXh_1_2_like 13 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02700 Viun-Chr1 36720951 36721722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02700 1 95 Miscellaneous Gene Families AT4G15670 50.526 8.67e-34 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02700 K03676 - gmx:100499748 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02700 1 36720951 36721722 Viun1g02700 1 36720951 36721722 ECH
Viun1g02700 1 36720951 36721722 Viun7g01672 7 21600536 21601163 PCT