Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01643 ATGGCCACCTACAAAAATGTTGGTGCTGTTCTCCTTTTCATTTTCTTCTCTTTTCTACACGTGGAGGCTATTTTAGACCCTGCCGATTTCCTCGCTCTGCAATCCATTCGTAAAGCCCTCGAAGACATGCCTGGTTCCCATTTCTTCTCCTCCTGGGATTTCACCGCAGACCCATGCAACTTCGCCGGGGTTTACTGCGACTCCGACAGGGTCATCTCCCTCAACCTCGGCGATCCCAGGGCGGGCTCTCCCGGACTCACCGGCCGCCTCGACCCCGCCCTCGGCAAGCTCTCCTCGCTCGCGGAGTTCACCGTTGTCCCCGGCAGAATCTACGGTCCTCTACCAGAATCCCTCTCCGATTTGAAGAACCTCAGGTTCCTCGGCGTCAACCGCAACTTCATCTCCGGCGAAATTCCGACCAAGCTCGGCGGGTTACGCAGCCTCAGAACCATCGATCTCAGCTACAACCAACTCACCGGACGCATTCCTCCAACCGTGGGATCCCTACCGGAGCTGACTAACCTGATCCTCTGCCATAACCGCCTCTCCGGTTCGCTCCCCCGGTTCGAGTCGCACACTTTAACACGGCTCGACCTAAAGCATAACTCTCTCTCCGGTTCGCTCCCTCCCAACTCGCTCCCTCCCTCTCTGCAGTACCTCTCCCTGGCCTGGAACCAGCTCACCGGCCCAATGGACCGCCTCCTGGGCCGCCTCGACCAGCTTAACTATTTGGACCTCAGTCTCAACCAGTTCACGGGCCCAATCCCGGACCGGATCTTCTCCTTCCCGCTCACGAATCTGCAGCTGGAGAGGAACCAGTTCTCGGGTCTGGTCCAGCCCGTTGAGCAGGTGTCCATCCCGACCGTTGATCTTAGTTACAACCGGTTGTCCGGTCAGATATCGCCAATGCTGGCGAGCGTGCAGTACCTGTACCTGAATAACAACCGATTTTCGGGTCGGGTACCGGCTAGCTTCGTGGAGCGGTTGCTGGACGCGAGCATTCAGATACTTTACTTGCAGCATAACTATCTGACGGGGATTGAGATAAGCCCAACGGCGGTGATTCCAGAGAGAAGCTCCCTGTGTCTGCAGTATAATTGCATGGTCCCGCCCGTTGAGACACCCTGCCCCTTGAGGGCTGGCAAGCAGAAAACTAGGCCTACTGCGCAATGCAACCAGTTGAAAACCTGA 1191 0.5701 MATYKNVGAVLLFIFFSFLHVEAILDPADFLALQSIRKALEDMPGSHFFSSWDFTADPCNFAGVYCDSDRVISLNLGDPRAGSPGLTGRLDPALGKLSSLAEFTVVPGRIYGPLPESLSDLKNLRFLGVNRNFISGEIPTKLGGLRSLRTIDLSYNQLTGRIPPTVGSLPELTNLILCHNRLSGSLPRFESHTLTRLDLKHNSLSGSLPPNSLPPSLQYLSLAWNQLTGPMDRLLGRLDQLNYLDLSLNQFTGPIPDRIFSFPLTNLQLERNQFSGLVQPVEQVSIPTVDLSYNRLSGQISPMLASVQYLYLNNNRFSGRVPASFVERLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCLQYNCMVPPVETPCPLRAGKQKTRPTAQCNQLKT 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01643 396 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 13 394 - -
Viun7g01643 396 Gene3D Ribonuclease Inhibitor 28 191 IPR032675 -
Viun7g01643 396 Pfam Leucine Rich repeat 191 206 IPR001611 GO:0005515
Viun7g01643 396 Pfam Leucine Rich Repeat 147 169 IPR001611 GO:0005515
Viun7g01643 396 FunFam Nuclear pore complex protein NUP107 27 188 - -
Viun7g01643 396 Gene3D Ribonuclease Inhibitor 192 370 IPR032675 -
Viun7g01643 396 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Viun7g01643 396 SUPERFAMILY L domain-like 38 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01643 Viun-Chr7 21234308 21236108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01643 86 326 Receptor kinase-like Gene Family AT5G62230 31.174 1.57e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01643 - - gmx:100800224 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01643 7 21234308 21236108 Viun7g01643 7 21234308 21236108 ECH
Viun1g01910 1 30642020 30643590 Viun7g01643 7 21234308 21236108 PCT