Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01910 ATGGATGTCGCTTCCTACTCTCTGCTTTTCATGTGCTTTCTCCAGTCGGTCAGAGCAATATTAGACCCCAACGATTTCCTCGCGCTGCAATCCATTCGGAAATCGCTTCACGATGTTCCCGGTTCTAATTTCTTCGCGTCCTGGGACTTCACCGCCGACCCCTGCAACTTCGCCGGCGTTTACTGCGTCGACGATAAAGTCGTTGCGCTCAACCTCGGCGACCCCAGGGCCGGTTCGCCCGGTCTCACTGGAAAACTCGACCATTCCATTTCCAAACTATCTGCTCTCGCCGACCTCACCGTCGTCCCCGGAAGAATATACGGCCCTCTCCCTCAGTCCATCTCCCAGTTAAAAAACCTCCGGTTCCTCGGCGTCAGCCGGAATTTCATCTCCGGCGAGATTCCGGCGGGTTTAGGTCAGCTTCGCAATATTAGAACAATCGATCTCAGTTACAACCAGCTCACCGGAACTATTCCTCCGTCCATCGGAACCTTACCGCAGCTAACCAACCTTATCCTCTGCCACAACCGCCTCTCCGGTTCAGTTCCCTCGTTCGCCTCGGCTTTTTCCCTCACCCGGCTCGAACTGAAGCACAACGCTCTCTCCGGTTCCCTCGGACCGTACTCTCTCCCTCCCTCCCTACACTACCTGTCTCTATCGTGGAACAAACTCACTGGACCGGTGGACCGCCTCTTAACGCGCCTCAATCGGCTTAACTACTTGGACCTTGGCTTGAACCAGTTCACAGGCCCAATTCCCACCCAAATATTCTCATTCCCCCTCACCAATCTACAACTGGAAAGAAACCAATTCTCCGGCCCGGTCCAACCGGTCAATGAGGTGACCATCCAGACCGTTGATCTCAGCTACAATAGGTTATCCGGTGAGGTGTCGCCAATGCTAGCGAACGTGCAGAACCTGTACCTGAACAACAACTGGTTCACGGGGCAGGTTCCCGGCAGCTTCGTGGAACGGTTATTGGCGGCGGGCATTCAGATACTGTACTTGCAGCACAATTTTCTTACCGGAATAGCAATAAGCCCGACGGCGGAGATTCCGGTGAGCAGCACCCTGTGTTTGCAGTACAACTGCATGGTGCCACCGGTTCAGACGGCGTGCCCCTTCAACGCCGGGAAGCGGAAAATCAGACCAGCTCAGCAGTGCAACCGCCGCTGA 1176 0.551 MDVASYSLLFMCFLQSVRAILDPNDFLALQSIRKSLHDVPGSNFFASWDFTADPCNFAGVYCVDDKVVALNLGDPRAGSPGLTGKLDHSISKLSALADLTVVPGRIYGPLPQSISQLKNLRFLGVSRNFISGEIPAGLGQLRNIRTIDLSYNQLTGTIPPSIGTLPQLTNLILCHNRLSGSVPSFASAFSLTRLELKHNALSGSLGPYSLPPSLHYLSLSWNKLTGPVDRLLTRLNRLNYLDLGLNQFTGPIPTQIFSFPLTNLQLERNQFSGPVQPVNEVTIQTVDLSYNRLSGEVSPMLANVQNLYLNNNWFTGQVPGSFVERLLAAGIQILYLQHNFLTGIAISPTAEIPVSSTLCLQYNCMVPPVQTACPFNAGKRKIRPAQQCNRR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01910 391 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 15 389 - -
Viun1g01910 391 FunFam Nuclear pore complex protein NUP107 23 184 - -
Viun1g01910 391 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Viun1g01910 391 Gene3D Ribonuclease Inhibitor 24 190 IPR032675 -
Viun1g01910 391 Pfam Leucine Rich Repeat 143 163 IPR001611 GO:0005515
Viun1g01910 391 SUPERFAMILY L domain-like 34 365 - -
Viun1g01910 391 Gene3D Ribonuclease Inhibitor 191 380 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01910 Viun-Chr1 30642020 30643590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01910 25 369 Receptor kinase-like Gene Family AT3G51740 32.778 1.77e-34 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01910 - - gmx:100817314 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01910 1 30642020 30643590 Viun1g01910 1 30642020 30643590 ECH
Viun1g01910 1 30642020 30643590 Viun7g01643 7 21234308 21236108 PCT