Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01638 ATGATTTCTCCAAGGCAAGATCCTCTTTTTTCACAGGCCGGCTTCTCCACCATGCTCAAGCTCCTCAACAAGAACATCCGCCGCTTCCTCCGCCGTCTCCGGTGGCCAATTCGCCGCCGCTCGAAGCCCAAAGTGGTAGTGATCAGCAAGCTCGGAAAGAACGCCCCAAAGGCCCAAACTGAGCCAAGCCCAAACCTTTCCGCGGCTGTTCATCCTAACGCGCAATTGGGTACTCCGAAGCCAATCCGGATCGCCACGTTCAACGCCGCGCTGTTCTCCATGGCCCCGGCGCTCCCGAAAGCTGCGCGCGAGTTGGGGGAGCAAAACGGCGTCGCTCCGAAGGCGAATTCGCGGCCGAGAAGCATACTGAAGCATTCGCCATCGCAGTCGCAATCAGTGAGGAACAGAGCAGAGGAGAACGTTGGCAGCAGACAGAAGATGAGGGTTTCCATAAATTTACCAGACAACGAGATTTCGCTGCTGCGAAGCCGACAATCGAGCTTCTCGGAACACGACAAGGAGGGGCTGAAGGCGTGGTCGGTGGGGGGAGGTGGGGCCCACGTGAGTAACAGAACGGTTGTTGAGGTTCTGAAGGAAGTGGACGCGGATGTTTTGGGTCTGCAAGATGTGAAGGCTGAGGAAGAGAATGGGATGAAGCCTTTGTCTGATTTGGCTGCGGCGCTGGGAATGAACTACGTCTTCGCCGAAAGCTGGGCACCTGAGTACGGCAATGCTGTCTTGTCCAAATGGCCCATCAAACGCTGCGTCTCTCACCAAATCTTCGATCACACTGATTTCAGGAATGTGCTGAAGGCCACTATCGATGTGCCTCAAGTAGGTGAACTTAACTTCTACTGTACCCATCTTGATCATCTTGATGAGAATTGGCGAATGAAGCAGGTAAATGCAATAATTCAATCTAGTGATGAGCCTCACATCTTAGCTGGAGGCCTTAATTCACTGGATGAATCAGATTACTCCCAAGAAAGATGGACAGATATTGTGAAGTACTATGAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTCAAGAGTAAAGACTACACTGATGCAAAGGGCTATGCAGGGGAATGCGAGTCTGTTGTCATGATTGCCAAGGGCCAAAGTGTTCAAGGCACATGTAAGTATGGAACTAGGGTAGATTACATATTATCATCATCAAATTCTCCATACAAGTTTGTTCCTGGTTCCTATTTAGTACTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTGAAGGCAAATGACAACCCTGAAGAGAAGGTGACAAAGAATACGCAACAACCAAGACAGAGAGTTGTAAAAATAACACAATCCACTCCCTCAAAAGGTATCTGGAAAACACACAATTGA 1401 0.4946 MISPRQDPLFSQAGFSTMLKLLNKNIRRFLRRLRWPIRRRSKPKVVVISKLGKNAPKAQTEPSPNLSAAVHPNAQLGTPKPIRIATFNAALFSMAPALPKAARELGEQNGVAPKANSRPRSILKHSPSQSQSVRNRAEENVGSRQKMRVSINLPDNEISLLRSRQSSFSEHDKEGLKAWSVGGGGAHVSNRTVVEVLKEVDADVLGLQDVKAEEENGMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRCVSHQIFDHTDFRNVLKATIDVPQVGELNFYCTHLDHLDENWRMKQVNAIIQSSDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSKDYTDAKGYAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSNSPYKFVPGSYLVLSSKGTSDHHIVKVDVVKANDNPEEKVTKNTQQPRQRVVKITQSTPSKGIWKTHN 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01638 466 SUPERFAMILY DNase I-like 178 427 IPR036691 -
Viun7g01638 466 Pfam Endonuclease/Exonuclease/phosphatase family 182 420 IPR005135 GO:0003824
Viun7g01638 466 MobiDBLite consensus disorder prediction 121 138 - -
Viun7g01638 466 FunFam Endonuclease/exonuclease/phosphatase family protein 178 430 - -
Viun7g01638 466 Gene3D Endonuclease/exonuclease/phosphatase 178 430 IPR036691 -
Viun7g01638 466 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 77 446 - -
Viun7g01638 466 MobiDBLite consensus disorder prediction 51 74 - -
Viun7g01638 466 MobiDBLite consensus disorder prediction 111 145 - -
Viun7g01638 466 MobiDBLite consensus disorder prediction 56 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01638 Viun-Chr7 21146003 21149877 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01638 - - gmx:100801298 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01638 7 21146003 21149877 Viun7g01638 7 21146003 21149877 ECH
Viun1g01924 1 30746475 30749140 Viun7g01638 7 21146003 21149877 PCT