Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01924 ATGCTTAAACTTCTCAACAAGAACCTCCGTCGCCTCAGCTCCCTCCTCAAGTCCTCACTACGGCGTCGTTCCAAGTCCAAGCCTAGCTTCGACAACCCCTCTCCCAAACCTCCCACCGAACCTCCCTCTCCTCCTTCCAAACCAATACGAATCGCTACGTTCAACGCCGCATTCTTCTCTATGGCACCGGTGCTTCTCGAACCAGACAGAAGCACCGCCTCGGACGACGACAACGTGGAGCGACCAAAGTCAACGTACGACCGACCACCACGGAGCATTTTGAAACAGTCGCAGTCTCCGCCGTTGGGGAAGTCAAAGCTGCGAGTGTCGATCAACTTACCCGACAACGAGATTTCGCTGCGGCAGACGAGTTTTTCGGAGCACGAGAGAGCAAAAGGGTCGTGGAGTTTCAGCGAGGAAGTGGAGGGAGAGAGGCAGAGGAAAACGGTGCTTGAAGTTCTGAGAGAAGTAAACGCCGACGTTTTGGGGTTGCAAGACGTGAAGGCGGAGGAAGAGAACGGGATGAAGCCTTTGTCTGATTTGGCTCGAGCTTTGGGAATGAACTACGTCTTCGCCGAAAGCTGGGCCCCTCAATACGGCAACGCCGTTCTCTCCAAGTGGCCCATTAAACGATGGAAGCTGCAGAAAATCTTCGACCACACCGATTTCAGGAATGTTCTGAAGGCCACTATCGATGTACCAGAAGAAGGTGAACTACACTTTTACTGCACCCACCTTGATCATCTTGATGAGAGTTTGAGAATGAAGCAGATAAATGCAATACTTCAATCTAATGATGAGCCACACATTTTAGCCGGTGGACTTAATTCTCTTGATGAATCGGATTATTCCCAAGAAAGATGGACAGATATTGTAAAGTACTATGAGGAGATGGGAAAGCCAACACCCAAGGTTGAAGTCATGAAATATCTGAAGAACAGACACTACAGAGATGCAAAGGACTTTTCAGGGGAATGTGAATCTGTTGTCATGATTGCCAAAGGACAAAGTGTCCAAGGAACGTGCAAGTATGGGACTCGGGTAGATTACATATTATCTTCCTCAGATTCCACATATGAATTTGTTTCAGGGTCTTACTTAGTCCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGCTGATGTGGTAAAAGTGAATAGAAATCCTCAAGAAAATCTGACAAAGAAGCAGGAACAATCAGGACACAATGTTCAGAGAATAAAATCAACTCCATCCAAATGTATATGGAAAACACAAACTCATGATATAGATTGA 1281 0.4684 MLKLLNKNLRRLSSLLKSSLRRRSKSKPSFDNPSPKPPTEPPSPPSKPIRIATFNAAFFSMAPVLLEPDRSTASDDDNVERPKSTYDRPPRSILKQSQSPPLGKSKLRVSINLPDNEISLRQTSFSEHERAKGSWSFSEEVEGERQRKTVLEVLREVNADVLGLQDVKAEEENGMKPLSDLARALGMNYVFAESWAPQYGNAVLSKWPIKRWKLQKIFDHTDFRNVLKATIDVPEEGELHFYCTHLDHLDESLRMKQINAILQSNDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKNRHYRDAKDFSGECESVVMIAKGQSVQGTCKYGTRVDYILSSSDSTYEFVSGSYLVLSSKGTSDHHIVKADVVKVNRNPQENLTKKQEQSGHNVQRIKSTPSKCIWKTQTHDID 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01924 426 MobiDBLite consensus disorder prediction 68 107 - -
Viun1g01924 426 MobiDBLite consensus disorder prediction 70 88 - -
Viun1g01924 426 Gene3D Endonuclease/exonuclease/phosphatase 134 386 IPR036691 -
Viun1g01924 426 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 47 401 - -
Viun1g01924 426 MobiDBLite consensus disorder prediction 17 48 - -
Viun1g01924 426 Pfam Endonuclease/Exonuclease/phosphatase family 144 377 IPR005135 GO:0003824
Viun1g01924 426 MobiDBLite consensus disorder prediction 90 105 - -
Viun1g01924 426 SUPERFAMILY DNase I-like 45 384 IPR036691 -
Viun1g01924 426 FunFam Endonuclease/exonuclease/phosphatase family protein 135 387 - -
Viun1g01924 426 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01924 Viun-Chr1 30746475 30749140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01924 - - vra:106757483 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01924 1 30746475 30749140 Viun1g01924 1 30746475 30749140 ECH
Viun1g01924 1 30746475 30749140 Viun7g01638 7 21146003 21149877 PCT