Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01626 ATGAATTTCTTCAAATCCGTTTTCCTTGATGACCCGGATCCTCCGCGACCCGAATCCGGATCGAGCAATGAGCCGCGAGTCCAGGACCCGGATCCCGACTCCCCGCCCCGATCCAGCACCACCGATTCCGGTGGTGGTGTCGGCGACGGTTGGAATTTCGGCGGCTTCATGCAAACCCTAACATCCAAATCGGAATCCATAATCGAGACCTACCGTCGCGATCTGCAGGAATTCAGCACCGGTTTGAAGAAGGAAATTGAGGTGGCGCAGGGCTCTCTCGGGAACGTGGGTCACGCCATTGACGAGTTCGGAAACACCGTCGTCAAAGGAACGGCTCAGATCATATCTCAAGGTATCCTCGCTGTGGATCTCGATTCTGATTCGGATAATAATAGCGTCAATAGGAGGAGCCTTGATTTGGCGCGGTATAGTAGGTTCGACGCTCAGGTTCGTGCGATTCAGGGTGATGTTAGCACTTACTCCGAGGAGCCCGAGGATTTGAGTGAGTTCAATGAATGGAAATTAGGGTTTTCGTTGGAGGGGAAAAGTGATGAAATGGAGGGGCTTTTCAGAGAGAATGATAATATGGAGAGTGTTTACAAAAGAGTTGTTCCGAGCAGTGTGGATCACGACACTTTCTGGTATAGGTATTTCTATAAGGTTTATAAGCTCAAGAAAGCTGAAGACCTTATGGCTAGGCTTGTGAGTGGAATTTCTGGGGTGGATGAGGATTTGAGTTGGGAAGTTGAAGATGATAATGAAGATGACGATGGAGGTGATGCTAAACCTCTGGTTTTGAATAAAGAGGTTGGTGGGGACAGTGTGGATACCCAGTTGCTTGTTGCCGGTGATGAAGGGGGAACGAAGAAATTGGACGTGGAAAAAGAGTCTAAAGTGGAGAAGAGAGACAATTTATTGCAAAGTGAGGAAGTTGGCAACAAGATAGATAAGTCTGTTGAGGAACCACATATTGAGAAATCTGAAATTGTTGGTGAGATGGCTGGTGTTGATGAGGCATCAAAAGTGGATGTTGGTGTGAGCAAGAATGATCCTGCAGCTGAAACTGGTGAGAAGGTTAAGGAAAGAGATGGTGGTCATGAGAAATCTTCCAGTAAAAGTAATGACTCCTCAGTGGTTGAAAATAAGCACTCGGCAAATGAGGAGGGGGATGAGGAGGACCTTGGGTGGGATGATATTGAGGATCTTAGCAGTATTGATGTGAAGGAAACATCGCACAGTGGTGGCACAAGCAAAGTTGATTTGCGGAAGCGATTTACTGCTGCGGAAGTAGATGAAGACTTGAGTTGGGACATTGAAGAAGATGATGATGATGAGCCTCCCAAGGTTTGA 1350 0.4733 MNFFKSVFLDDPDPPRPESGSSNEPRVQDPDPDSPPRSSTTDSGGGVGDGWNFGGFMQTLTSKSESIIETYRRDLQEFSTGLKKEIEVAQGSLGNVGHAIDEFGNTVVKGTAQIISQGILAVDLDSDSDNNSVNRRSLDLARYSRFDAQVRAIQGDVSTYSEEPEDLSEFNEWKLGFSLEGKSDEMEGLFRENDNMESVYKRVVPSSVDHDTFWYRYFYKVYKLKKAEDLMARLVSGISGVDEDLSWEVEDDNEDDDGGDAKPLVLNKEVGGDSVDTQLLVAGDEGGTKKLDVEKESKVEKRDNLLQSEEVGNKIDKSVEEPHIEKSEIVGEMAGVDEASKVDVGVSKNDPAAETGEKVKERDGGHEKSSSKSNDSSVVENKHSANEEGDEEDLGWDDIEDLSSIDVKETSHSGGTSKVDLRKRFTAAEVDEDLSWDIEEDDDDEPPKV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01626 449 MobiDBLite consensus disorder prediction 21 46 - -
Viun7g01626 449 MobiDBLite consensus disorder prediction 311 332 - -
Viun7g01626 449 MobiDBLite consensus disorder prediction 311 423 - -
Viun7g01626 449 ProSiteProfiles BSD domain profile. 173 225 IPR005607 -
Viun7g01626 449 MobiDBLite consensus disorder prediction 353 370 - -
Viun7g01626 449 Gene3D BSD domain 136 236 IPR035925 -
Viun7g01626 449 PANTHER SYNAPSE-ASSOCIATED PROTEIN 15 437 - -
Viun7g01626 449 SMART wurzfinal6 173 225 IPR005607 -
Viun7g01626 449 SUPERFAMILY BSD domain-like 142 229 IPR035925 -
Viun7g01626 449 MobiDBLite consensus disorder prediction 401 423 - -
Viun7g01626 449 MobiDBLite consensus disorder prediction 1 51 - -
Viun7g01626 449 Pfam BSD domain 173 229 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01626 Viun-Chr7 21017804 21019485 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01626 - - gmx:100796508 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01626 7 21017804 21019485 Viun7g01626 7 21017804 21019485 ECH
Viun1g01927 1 30761864 30763571 Viun7g01626 7 21017804 21019485 PCT