Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01625 ATGGTGGCAGGCCCAACCTCACCCTCCGATCGACCCACCATGGCCCCTCCCCCAATGCTCCTCTCCGACTCGGTCGCCAAGGATGCCATACTGGCTTGGTTTCGCGGCGAGTTCGCTGCAGCCAACGCCATCATCGACGCCCTCTGCGCTCACCTCGCCACCTCTACCCACGACTATGATGCTGCCTTCACCGCCATCCACCGCCGTAGGCTCAACTGGATCCCCGTCCTCCAGATGCAGAAGTACCACTCCATTGCCGACATCACCCTTGAGCTCCGCAGGGTCTCCGACAGAAACCACAACGCTGACGATCAACCCAAATCCGACGACAAAACGACGTCGCCAGAGAGTGTCGTCGAAAATGGTGCGGCTGATGAACACGAGGAGTATGAATCGCCTGAGAGCGAGATTACTGATTCAGGATCTCAAGAAATGCAGGCTAGTTCCATGAACGTTAATTTATGTTCCAATCATGAACTTTGTGAAGGACGTCCTTCACAGTTTAAGTTGACTAAAGGTTTTACTGCAAAAGAGTCTGTCAAGGGACATATGGTGAATGTAGTAAAAGGATTGAAGTTATATGAAGACATTTTCACTGATTTAGAACTATGCAAGTTGACAGACTTTGTGAATGAGATTCATGCTGCTGGTCAGAATGGAGAACTGTGTGGTGAAACTTTTATATTATTCAACAAGCAGATGAAGGGAAACAAGAGAGAACTGATTCAGCTGGGTGTTCCAATATTTGGACAGATAAAGGAGGACGTAAAAAGCAATATAGAGCCAATTCCTGCACTTCTCCAAGGTGTCATTGATCACATGATTCAGTGGCAATTACTTCCCGAGTACAAAAGACCAAATGGTTGTATTATCAACTTTTTTGAAGAGGGGGAGTTTTCTCAACCATTCCTCAAACCACCGCATCTGGATCAACCTGTGTCCACTCTTCTTCTCTCTGAATCAACAATGGCTTTCGGACGTGTACTTATGAGTGAAAATGATGGAAACTACAAAGGACCTCTCATGCTCTCATTGAAGCAGGGGTCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGGCACGTAATGTGTCCATCTCCTAACAGAAGGGTCAGCATCACCTTCTTCAGAGTGAGGCCAGATTCCAATCAATACCAGTCACCAACTCCTGCTATGACAAGTGCGATGACTCTGTGGCAACCTGGCATTGCTAGTCCATATGCTTTGCCAAATGGTGCTCTAAGTAGCTATGAGGGTATGGACATGATGCCAAAATGGGGAGTGCTTCGTGGTCCAATGGTGATGCTAACTCCTGTGCGTCCTGTAGCATTGACTCCTCGCAAACTTGCTGGTGGTGGAACTGGGGTGTTTTTGCCATGGAATGTTCCATCTAGAAAACCTGCCAGGCATCTTCCCCCACGTGCCCAAAAAGGGAGGCTTCTCACATTACCTTCACCCGTTGTTGAACCCCAAATGGGAGAATCCACTTCTGAACCAAGCAGCATTTGTGTTGAAGGATAA 1527 0.4787 MVAGPTSPSDRPTMAPPPMLLSDSVAKDAILAWFRGEFAAANAIIDALCAHLATSTHDYDAAFTAIHRRRLNWIPVLQMQKYHSIADITLELRRVSDRNHNADDQPKSDDKTTSPESVVENGAADEHEEYESPESEITDSGSQEMQASSMNVNLCSNHELCEGRPSQFKLTKGFTAKESVKGHMVNVVKGLKLYEDIFTDLELCKLTDFVNEIHAAGQNGELCGETFILFNKQMKGNKRELIQLGVPIFGQIKEDVKSNIEPIPALLQGVIDHMIQWQLLPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPVSTLLLSESTMAFGRVLMSENDGNYKGPLMLSLKQGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQYQSPTPAMTSAMTLWQPGIASPYALPNGALSSYEGMDMMPKWGVLRGPMVMLTPVRPVALTPRKLAGGGTGVFLPWNVPSRKPARHLPPRAQKGRLLTLPSPVVEPQMGESTSEPSSICVEG 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01625 508 Gene3D - 174 389 IPR037151 -
Viun7g01625 508 MobiDBLite consensus disorder prediction 491 508 - -
Viun7g01625 508 MobiDBLite consensus disorder prediction 98 148 - -
Viun7g01625 508 MobiDBLite consensus disorder prediction 98 114 - -
Viun7g01625 508 MobiDBLite consensus disorder prediction 469 508 - -
Viun7g01625 508 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 285 382 IPR005123 -
Viun7g01625 508 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 26 126 IPR044842 GO:0003729|GO:0006402|GO:0032451
Viun7g01625 508 SUPERFAMILY Clavaminate synthase-like 184 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01625 Viun-Chr7 21011610 21017089 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01625 K10767 - gmx:100791586 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01625 7 21011610 21017089 Viun7g01625 7 21011610 21017089 ECH
Viun1g01928 1 30764233 30770957 Viun7g01625 7 21011610 21017089 PCT