Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01611 ATGTTCTGCAAAACCAAAACCCACACTCTTTTCTACCATAACAATGCAAGAACTATATCAAGCCTCAAAGTAGTGTGGCGCAAGGACCCAGCACTGGACCGAGCCATAGAGTACGACAAGCGTTACAAGCAATGTGCCCGCGTCGTCAAAGAAGTCCTCAACGAACCAGGCCAAGTCATTCCTCTACGCTATCTCGAGAAGCGCCGCGAAAGGATGCGCCTCAAGGTCAAAGCTGAAACCTTTATCAACCAAAACCCCGGTCTGTTCGATGTCTACTATAGTCGCATCAAACCCAAAAGCGAACCGGTTCGCTTCATACGCCCCTCCGACCGCCTTCACTGCTTTCTCCAGGAAGAGCAACGGATTTTCTCCGAGAACGAGCCCTTCATTGTCTCCAAGTTGTGTAAACTGTTAATGATGTCCAAGAACAAGTTTATCAGTGCTGATAAGTTGCTTCACGTGAAGAGGGAGTTCGGGTTCCCTAATGATTTTTTGGTTGATTTGGTTCCTCGGTATCCGCAATATTTTAGGTTAACTGGGTCTCCTGGGGAGGGGAAATCGTTTCTTGAATTGGTTGATTGGAACCCCGAGTTTGCAAAATCTGTTATTGAGAAAAGGGCCGAGGAGGAGAGTGAGCGATTGGGGATTAGGGTTAGGCCTAATTTCAATGTGGAGCTGCCGCCAGGGTTTGTGTTGAAGAAGGAGATGAGAGAGTGGGTTAGGGATTGGCTTGAGCTTGATTATGTGTCCCCTTATCAGGATGTGTCCCATTTGGACCAGGCTTCCAGAGAGATGGAGAAGAGATCCGTTGGAGTGTTCCATGAATTGCTTTCTCTTTCCTTGCATAAGAGGATTCCGGTTCCGATCCTTGGAAAGTTTTGCGATGACTATAGGTTTTCCAATGCGTTTTCCAGCACTTTTACCCGTCATTCAGGGATATTCTATTTGTCCTTGAAAGGTGGGATTGAGACGGCATTGCTGAGAGAAGCATACCGAGGTGAGGAGTTGATTGACCGTGATCCGTTGCTTCGGATAAAAGATAAATTTGTTGAGTTGTTGGAGGAGGGATGGCGGCAAAGAAAGGAGCAATTGATATTGAAGCAAGAAAGGATCAATGAAGATATGGAGCTATTGGCCACGAAAGTTGGTGAATGA 1155 0.4667 MFCKTKTHTLFYHNNARTISSLKVVWRKDPALDRAIEYDKRYKQCARVVKEVLNEPGQVIPLRYLEKRRERMRLKVKAETFINQNPGLFDVYYSRIKPKSEPVRFIRPSDRLHCFLQEEQRIFSENEPFIVSKLCKLLMMSKNKFISADKLLHVKREFGFPNDFLVDLVPRYPQYFRLTGSPGEGKSFLELVDWNPEFAKSVIEKRAEEESERLGIRVRPNFNVELPPGFVLKKEMREWVRDWLELDYVSPYQDVSHLDQASREMEKRSVGVFHELLSLSLHKRIPVPILGKFCDDYRFSNAFSSTFTRHSGIFYLSLKGGIETALLREAYRGEELIDRDPLLRIKDKFVELLEEGWRQRKEQLILKQERINEDMELLATKVGE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01611 384 Pfam Plant organelle RNA recognition domain 28 357 IPR021099 GO:0003723
Viun7g01611 384 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 14 364 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01611 Viun-Chr7 20845155 20846920 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01611 - - vum:124828979 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01611 7 20845155 20846920 Viun7g01611 7 20845155 20846920 ECH
Viun1g02671 1 36512464 36515262 Viun7g01611 7 20845155 20846920 PCT