Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02671 ATGTTTTATTGGACAGTGGGTGAGGGCCCATTGGCTGACGGTGATGATGGCCGAACACGAAGAGGGGTTAGGGGAAGATTGTTGCAAGGTTGGGAGATGAACAAAAATGGCGTCACTCCGTGGATGAAGCAGCAATGGCGGGGCATAGTGAAAGTCCGTTTGAAATGGGTGAAGAACCGAAGCCTCGACCACGTCATCGACAAGGAAACCGATCTCAAAGCGGCATGCCTCCTGAAAGACGCCATCAACCGCTCCTCCACCGCCTTCCTCACGGCGAAATCTGTGGCAGACTGGCAGAAGCTCCTCGGCCTCACCGTCCCCGTCCTCCGCTTCCTCCGCCGCTACCCCACACTCTTTCAAGAGTTCCCGCACCCGCGCTGGCCCTCTCTTCCCTGCTTCCGCCTCACCGACACTGCACTTTTCCTACACTCCCAGGAACTCGCCCTCCACCAAGCTCACCAAAACGACGCCGTCGAACGCCTCTCCAAGCTCCTCATGATGACCCGCTCACGCGCCCTGTCACTCTATTCCCTCCACTCGCTGAAGTGGGACCTCGGCTTACCCGACTCCTTCGAGAAAACCCTCGTCCCCAACTTCCCTAACGACTTCCAATTCGTCAAGTCCAACGGCGTCGCTTCGCTCAAACTAGCACGATGGCCCGAGGAATACGCTGTGTCCGCGCTGCAGCAGAGAAACGAGTGTGGGACCCACTACCGGGAATTCAAGCGGGGACAATCCGCGTTGGCTTTTCCAATGAAGTTTCCGAGGGGTTACGGCGCGCAGAAGAAGGTGATGACGTGGATGGATGAGTTTCAGAAGCTGCCTTATGTTTCTCCCTATGTTGATTCCTCCAAGATTGATCCCAACAGCGATTTGATGGAGAAGCGCGTGGTTGGGGTTCTGCACGAGCTTTTGAGTTTGACTCTGCACAAGAAAACCAAGAGGAACTACTTGAGGAGCTTGAGGGATGAGTTGAATCTTCCGCACAAGTTTACCCGGATTTTCACCCGGTATCCCGGCATTTTTTACCTCTCATTGAAGTGTAAAACGACCACTATTACTCTCAGGGAAGGGTACCAGAGTGGGAAACTGGTTGACCCGCACCCTCTTGTCCGACATAGAGATAAGTTCTACCGTGTCATGCAGACGGGGCTTCTCTATCGCGGGGATGGGTCATTGAAACATGACGACAACAATTCGTTGGTGGAGAATGATGAGCTAAGAAGCGAGGATTCTGGGGAGGAAGAGGTTGAAACGAGTGATGAACTCTGTGAGGGTGAATCGAGTGATGAACTCTGCGAGGGTGAAGCGAGTGAATAA 1320 0.5394 MFYWTVGEGPLADGDDGRTRRGVRGRLLQGWEMNKNGVTPWMKQQWRGIVKVRLKWVKNRSLDHVIDKETDLKAACLLKDAINRSSTAFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFQEFPHPRWPSLPCFRLTDTALFLHSQELALHQAHQNDAVERLSKLLMMTRSRALSLYSLHSLKWDLGLPDSFEKTLVPNFPNDFQFVKSNGVASLKLARWPEEYAVSALQQRNECGTHYREFKRGQSALAFPMKFPRGYGAQKKVMTWMDEFQKLPYVSPYVDSSKIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLRDELNLPHKFTRIFTRYPGIFYLSLKCKTTTITLREGYQSGKLVDPHPLVRHRDKFYRVMQTGLLYRGDGSLKHDDNNSLVENDELRSEDSGEEEVETSDELCEGESSDELCEGEASE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02671 439 MobiDBLite consensus disorder prediction 408 439 - -
Viun1g02671 439 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 42 414 IPR045040 GO:0003723
Viun1g02671 439 MobiDBLite consensus disorder prediction 396 439 - -
Viun1g02671 439 Pfam Plant organelle RNA recognition domain 57 384 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02671 Viun-Chr1 36512464 36515262 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02671 - - vun:114164383 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02671 1 36512464 36515262 Viun1g02671 1 36512464 36515262 ECH
Viun1g02671 1 36512464 36515262 Viun7g01611 7 20845155 20846920 PCT