Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01577 ATGGAGCTCAGTAAAGTCACCTTAGAGATCTTCTCCAAACTCGAACACAAATGGCTCTCACATTGTAAACCCAACAACAAAACCCGCATTCTCAGCATTGACGGCGGAGGGACCACCGCCATTGTCGCCGGCGAAGCTCTCATCCACCTCGAGGATCAGATCCGTCTCCACACCTCCGATCCCCAAGCACAGGTCGCGGATTTCTTCGACATCGTCGCCGGCACTGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCCGGCGACGCCTTCGGCAGGCCGATGTACACCGCCAGAGAAGCCGTCCGTATCGTCTCCGAGAGGAACTCCGAACTCTATAAGTTCAAATCCGGAGGCGTGTTCCGCCGGCGCCGGAAAATCTCCTCCAGTAGCATGGACAGCGTGTTGAAGCAAGTGTTCCAGAGGAAGGAGGACGGACGGTTGTTGACCTTGAAGGACACGTGTAAACCGCTCCTTATCCCTTGCTTCGACCTCAAGAGTTCCGCGCCGTTCGTCTTTTCGCGCGCCGATGCGTCCGAGTCTCCGAGCTTCGACTTCGAGCTCTGGAAGGTGTGTCGCGCCACGTCAGCGACGCCGAGCCACTTCAAGCCGTTCGACCTGGCTTCCGTCGACGGCAAGACCTTGTGCTCCGCCGTGGACGGCGGCCTGGTGATGAACAACCCTACGGCGGCGGCCGTTACGCACGTTCTCCACAACAAGCACGATTTCCCGTCGGTGAACGGCGTGGAGGATCTCCTGGTCCTTTCCTTGGGGAACGGATCGTCGAACACCAAAGCGTGCGAGAACAGCACGTGCTCCACACCATCGGTGGTTGACATTGTGCTCGACGGCGTTTCCGAGACCATTGACCAGATGTTGGGGAACGCTTTCTGTTGGAACCGTACGGACTACGTCAGAATCCAGGCCTTCGGTTTGGGAAGCAAAGCAATGAGGAAGGAGGAGGTGCTCAAAGAGAGAGGACTGGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGACGGAGACTAACGGAAACAGAATAGATAGCTTCGTGCAACGTCTTGTTGCAGCCGGAAAACCAAGCCCGCCATCTAGTCCGTGCAAGGATTCCGCCGTCAACCCTCTCGCTAACGGCCGCTAG 1140 0.5781 MELSKVTLEIFSKLEHKWLSHCKPNNKTRILSIDGGGTTAIVAGEALIHLEDQIRLHTSDPQAQVADFFDIVAGTGIGAILAAMITAGDAFGRPMYTAREAVRIVSERNSELYKFKSGGVFRRRRKISSSSMDSVLKQVFQRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPSHFKPFDLASVDGKTLCSAVDGGLVMNNPTAAAVTHVLHNKHDFPSVNGVEDLLVLSLGNGSSNTKACENSTCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGSKAMRKEEVLKERGLESLPFGGKRLLTETNGNRIDSFVQRLVAAGKPSPPSSPCKDSAVNPLANGR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01577 379 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Viun7g01577 379 CDD Pat17_PNPLA8_PNPLA9_like 30 309 - -
Viun7g01577 379 SUPERFAMILY FabD/lysophospholipase-like 26 310 IPR016035 -
Viun7g01577 379 MobiDBLite consensus disorder prediction 357 379 - -
Viun7g01577 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Viun7g01577 379 PANTHER PATATIN-LIKE PROTEIN 6 1 369 - -
Viun7g01577 379 Gene3D Cytosolic phospholipase A2 catalytic domain 16 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01577 Viun-Chr7 20356288 20357952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01577 1 379 Acyl Lipid Metabolism Gene Families AT3G63200 71.688 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01577 - - gmx:100795441 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01577 7 20356288 20357952 Viun7g01577 7 20356288 20357952 ECH
Viun1g01989 1 31222987 31224611 Viun7g01577 7 20356288 20357952 PCT