Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01553 ATGGCTTTTAGAGGGTTTGTGTTGTGTGTAGTTACGGTTATGGTGGCCACTATGTGGACTCAAAATGCTACTGCTCAATCAGGTTGCACCAGCACACTCACTAGCTTGAGCCCTTGCCTGAACTACATAATGGGAAGTTCTTCAACCCCATCAACTTCATGTTGCTCTCAGCTCTCCACCGTTGTCCAATCTTCACCACAGTGCCTTTGCTCCGTGCTCAATGGTGGTTCCACTTTCGGAATTACCATCAATCAGACTCTTGCTTTGTCTCTCCCTGGCGCTTGTAAAGTTCAAACTCCCCCAGTTAGCCAGTGTCAAGCTGGGAATGGACCAACATCTCCTTCCACTGCTCCAGTTGGTTCTCCTTCTGATTCTTCACCTGAATCCCCTCAAGAATCAATATCACCTTCTGCTTCAGACTTTCCCTCAGGTGCAGGATCTAAAACAGTGCCATCAACAGATGGTGGTTCATCTGATGGAAACGCTATTGAAGTCCCCTCTCACATGGTGTTCTATCTTATTGCCGTTGTGTCTTGTGTTTTAACTTTTATCAAGTTCTGA 561 0.4635 MAFRGFVLCVVTVMVATMWTQNATAQSGCTSTLTSLSPCLNYIMGSSSTPSTSCCSQLSTVVQSSPQCLCSVLNGGSTFGITINQTLALSLPGACKVQTPPVSQCQAGNGPTSPSTAPVGSPSDSSPESPQESISPSASDFPSGAGSKTVPSTDGGSSDGNAIEVPSHMVFYLIAVVSCVLTFIKF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01553 186 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 158 IPR043325 -
Viun7g01553 186 SMART aai_6 29 105 IPR016140 -
Viun7g01553 186 CDD AAI_LTSS 36 97 - -
Viun7g01553 186 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 106 IPR036312 -
Viun7g01553 186 MobiDBLite consensus disorder prediction 102 160 - -
Viun7g01553 186 Gene3D - 26 105 IPR036312 -
Viun7g01553 186 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Viun7g01553 186 PRINTS Plant phospholipid transfer protein signature 49 63 IPR000528 GO:0006869|GO:0008289
Viun7g01553 186 PRINTS Plant phospholipid transfer protein signature 82 99 IPR000528 GO:0006869|GO:0008289
Viun7g01553 186 Pfam Probable lipid transfer 11 105 IPR016140 -
Viun7g01553 186 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 26 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01553 Viun-Chr7 20058163 20059254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01553 1 184 Acyl Lipid Metabolism Gene Families AT2G48130 43.548 1.45e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01553 - - gmx:100306151 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01553 7 20058163 20059254 Viun7g01553 7 20058163 20059254 ECH
Viun7g01553 7 20058163 20059254 Viun1g02011 1 31587854 31589054 PCT