Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02011 ATGGCACCCAGAAGGATGAAGATGCTGCTAAGGCTGTGCTTTGTGGTGGCTCTTTGGGGTGCCACATCGGCTCAACCTCAATCAAGTTGCACCAATGTGTTCATAAGTCTTGCTCCTTGCCTTGACTATGTAACAGGAAATGCATCAACCCCTTCCTCTTCTTGCTGCTCTCAACTTTCCTATGTCGTGACTTCACAACCACTGTGCCTGTGTGAGGTTGTTAGCGGCGCTGCTTCATCTATTGCTGCAAGTTTCAACATCAATCAGACTCGGGCTTTGTCTCTTCCCACTTCTTGCAACATTCAGACACCCCCTCTTAGCACCTGCACTGCCTCAGCTTCTTCCTCACCAGCGTTTTCCGTCTCAAACTTTCCCAACTCCCCTTCAGGGATTGGATCTGACACTGTTTCATCAGCGACCGGAGGTAGTAGAAGTGTCGGTGGTTCATCTCACGGAAATTCAAGTTCCTCTACTAAATTATCGTGTTCTTGGTTTCTGATGTTTGCCCTTGCAACCGCTTTGACTTTCACCTTCAAGAGTACGACCTACACCACATCGCTGAACCTTTTTTAA 573 0.4799 MAPRRMKMLLRLCFVVALWGATSAQPQSSCTNVFISLAPCLDYVTGNASTPSSSCCSQLSYVVTSQPLCLCEVVSGAASSIAASFNINQTRALSLPTSCNIQTPPLSTCTASASSSPAFSVSNFPNSPSGIGSDTVSSATGGSRSVGGSSHGNSSSSTKLSCSWFLMFALATALTFTFKSTTYTTSLNLF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02011 190 Gene3D - 27 111 IPR036312 -
Viun1g02011 190 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 13 154 IPR043325 -
Viun1g02011 190 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Viun1g02011 190 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Viun1g02011 190 PRINTS Plant phospholipid transfer protein signature 29 45 IPR000528 GO:0006869|GO:0008289
Viun1g02011 190 Pfam Probable lipid transfer 22 109 IPR016140 -
Viun1g02011 190 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 111 IPR036312 -
Viun1g02011 190 CDD AAI_LTSS 37 101 - -
Viun1g02011 190 SMART aai_6 30 109 IPR016140 -
Viun1g02011 190 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02011 Viun-Chr1 31587854 31589054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02011 1 178 Acyl Lipid Metabolism Gene Families AT2G48130 38.542 4.02e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02011 - - gmx:100789510 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02011 1 31587854 31589054 Viun1g02011 1 31587854 31589054 ECH
Viun7g01553 7 20058163 20059254 Viun1g02011 1 31587854 31589054 PCT