Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01549 ATGAGAGATGAGCACTCGAAGAAAAGCAAGCTTTCATGGCCCAAGACGTTGGTCAAGAAGTGGTTCAATATTAAGAGCAAAAGCGAGGACTTTCACGCAGATGACGTCCTCTACGCAGGTGTTAATGAAGAGTGGAGCAACAACTGTTCGCAGAGGGAAGAATACACCATCAAGAAAAGCAAAACAGAGAGAGCAAAGAGAAGGCACTCAGACAGAATGCGGCGAGGCAAGGTTGACTTTGATGCAGCTCAGGATACAGATGTGCATAACTATAGAATCTTTGCTGCTACTTGGAATGTAGCTGGAAAATCTCCTCCAAGTTATTTGAATCTGGAAGATTGGCTTCACTCTTCTCCTCCTGCTGATATCTATGTTCTTGGATTTCAAGAAATTGTACCTCTCAATGCTGGTAATGTTTTGGGCACGGAAGATAATGGCCCTGCCAGAAAGTGGTTAGCTCTTATTAGAAAGACCCTAAACAGTCTTCCCGGAACAAGTGGTGAATGCCACACCACTTCACCACTTCCTGATCCTATTGTAGAGTTAGATGCTGATTTTGAGGGATCAATGAGGCAAAAGGCAACCTCTTTCTTTCATCGCCGGTCGTTCCAATCCTTCAGTCATAGTATGAGAATGGACAATGACATGTCACTTCCACAAGCATACCTTGATCGGCGCCTCAGCGTCTGTGACAGAATGATGTCTGGTCACAGAACAAGTGATTACGACCCCAACTATAGATGGGCTTCTTCGGACGATGAAAATGGCACTGGTGACTCCCCAGTTGCAACACAATATTCACCAATGACATGTAAAGGTTTTTTCTCTATGGAGGATAGAGATAGACAAACAGGGCACTCAAGATACTGCTTGGTTGCCAGTAAACAAATGGTTGGAATATTTCTAACAGTTTGGGTGAAAAGTGATATAAGAGATGATGTTCACAACATGAAAGTATCTTGTGTTGGCAGAGGATTAATGGGATATCTTGGAAACAAGGGTTCAATATCTATTAGCATGTCTTTGCACCAAACAAGCTTTTGCTTCATCTGTAGTCATTTGACTTCCGGACAAAAGGAGGGTGACGAGCTAAGGAGAAATTCTGATGTAATGGAGATTCTGAGAAAGACAAGGTTTCCCCGAGTTCATGGCATGGGTGATGAGAGTTCTCCACAGACAATTTTGGAGCATGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATAACTGGAAGGATCTGTTAGAGAATGACCAGCTACATATAGAGCGGAGACAAGGTCGAGTTTTTGAAGGATGGAATGAGGGGAAAATATATTTCCCTCCCACATACAAGTATTCAAACAACTCAGATAGATATGCAGGCGATGAAAGACACTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTACGGTAGAGGCCTCCGCCAATTATCTTATGTTCGTGGGGAATCAAGATTCTCAGATCATAGGCCAGTTTATAGCATGTTCCTGGCAGAAGTTGAGTCTGTTAGCCGTAGCCGAATAAAAAAATGTTCTAGTTGCTCCAGTTCAAGGATTGAAGTAGAAGAGCTTTTGCCTCATTCACATGGTTACAGATATGCTGATTTGATTTTCTATTAA 1683 0.4266 MRDEHSKKSKLSWPKTLVKKWFNIKSKSEDFHADDVLYAGVNEEWSNNCSQREEYTIKKSKTERAKRRHSDRMRRGKVDFDAAQDTDVHNYRIFAATWNVAGKSPPSYLNLEDWLHSSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGECHTTSPLPDPIVELDADFEGSMRQKATSFFHRRSFQSFSHSMRMDNDMSLPQAYLDRRLSVCDRMMSGHRTSDYDPNYRWASSDDENGTGDSPVATQYSPMTCKGFFSMEDRDRQTGHSRYCLVASKQMVGIFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVHGMGDESSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHNWKDLLENDQLHIERRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDERHSKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVYSMFLAEVESVSRSRIKKCSSCSSSRIEVEELLPHSHGYRYADLIFY 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01549 560 SUPERFAMILY DNase I-like 81 533 IPR036691 -
Viun7g01549 560 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 537 IPR045849 GO:0004445
Viun7g01549 560 FunFam Type IV inositol polyphosphate 5-phosphatase 7 259 545 - -
Viun7g01549 560 Pfam Endonuclease/Exonuclease/phosphatase family 96 510 IPR005135 GO:0003824
Viun7g01549 560 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 71 183 - -
Viun7g01549 560 Gene3D Endonuclease/exonuclease/phosphatase 251 545 IPR036691 -
Viun7g01549 560 Gene3D Endonuclease/exonuclease/phosphatase 70 210 IPR036691 -
Viun7g01549 560 SMART i5p_5 225 525 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01549 Viun-Chr7 19954317 19958537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01549 292 527 Acyl Lipid Metabolism Gene Families AT2G43900 29.242 1.74e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01549 - - gmx:100788764 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01549 7 19954317 19958537 Viun7g01549 7 19954317 19958537 ECH
Viun1g02016 1 31605531 31610117 Viun7g01549 7 19954317 19958537 PCT