Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02016 ATGAGAGATGAGAACTCGAAGAAGAGCAAGCTTTCTTGGCCAAAAACATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCAGAGGATTTTCAGGCAGATGATGTTCTCTCCCAAGGTGTTGATGAAGAGTGTAGTAGCAACTACTCAGAGAGGGAGGCATGCACCATCAGGAAAAGCAAATCAGAGAGATCAAGCAGATGGTACTCAGACAGATCGCGAAGAGGTAAGAATGACCTTGATAAAGCTCAGGTTACAGATGTGTATAACTATAGAATCTTTGCTGCCACTTGGAATGTAGCAGGGAAGTCACCTCCAAGTTATTTGAGTCTTGAAGATTGGCTTCACACCTCTCCACCAGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTTAATGCTGGTAATGTTTTGGGAACAGAAGACAATGGTCCTGCAAGAAAATGGCTAGCCCTTATTAGGAGGACCTTGAACAACCTTCCTGGAACAAGTGGAGGATGCCACACACCTTCACCCCTCCCTGATCCTATTGTAGAGCTAGATGCTGATTTTGAGGGATCAGTGAGGCAGAAGACAACCTCTTTCTTTCAACGAAGATCCTTCCAATCCCTGAGTCGTAGTTTGAGAATGGACAATGATATGTTAATGCAACAAGCATGCTTTGATCGCCGTTTCAGTGTCTGTGATAGAGTGATATTTGGTCACCGAGCGAGTGACTATGACCCCAATTATCGATGGGGTTCCTCAGATGAAGAAAATGGCGCTGGTGACTCTCCAATTACAGCACAATATTCACCAATGTCGTATGGTGGTTGTTTCTCTGCAGAGGACAGTGATAGACAGACAGGCACAGGCCACTCAAGATACTGCTTGGTCGCTAGCAAGCAAATGGTTGGGGTATTTCTAACTGTTTGGGTGAAAAGTGATATAAGAGATGATGTTCACAACATGAAAGTGTCTTGTGTTGGCCGAGGGTTGATGGGATATCTCGGAAACAAGGGATCAATATCAATTAGTATGTCATTGCACCAAACAAGCTTTTGCTTCATTTGTAGTCATTTGACTTCTGGACAAAAGGATGGTGATGAGTTAAGGAGAAACTCGGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCCAGTCCACGACATGGGTGATGAGAATTCTCCTCAGACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGATTTAAACTACCGGATAGCACTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATGATTGGAAGACTTTGTTAGAGAATGACCAGCTGTGTATAGAGCAGAGGCAAGGTAGAATCTTTGAAGGATGGAACGAAGGGAAAATATATTTCCCTCCAACTTATAAGTATTCAAACAATTCAGACCGATATGCAGGCGATGACAGGCGCTCAAAACAAAAGAGAAGAACTCCAGCATGGGGCCTTCACCAATTATCATATGTTCGTGGGGAGTCAAGATTTTCTGATCACAGGCCAGTTTATAGCATATTCTTGGCAGACGTTGAGTCTATTAGCTGCAACCAAATAAAGAAAAGCTCCAGTTCCAGGATTGATGTAGAAGAGTTGTTTCCACATTCACATGGTTATGGCTACACTGATCTGCACTACTTTTGA 1653 0.4313 MRDENSKKSKLSWPKTLVKKWFNIKSKAEDFQADDVLSQGVDEECSSNYSEREACTIRKSKSERSSRWYSDRSRRGKNDLDKAQVTDVYNYRIFAATWNVAGKSPPSYLSLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRRTLNNLPGTSGGCHTPSPLPDPIVELDADFEGSVRQKTTSFFQRRSFQSLSRSLRMDNDMLMQQACFDRRFSVCDRVIFGHRASDYDPNYRWGSSDEENGAGDSPITAQYSPMSYGGCFSAEDSDRQTGTGHSRYCLVASKQMVGVFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNSDVMEILRKTRFPPVHDMGDENSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHDWKTLLENDQLCIEQRQGRIFEGWNEGKIYFPPTYKYSNNSDRYAGDDRRSKQKRRTPAWGLHQLSYVRGESRFSDHRPVYSIFLADVESISCNQIKKSSSSRIDVEELFPHSHGYGYTDLHYF 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02016 550 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 525 IPR045849 GO:0004445
Viun1g02016 550 Gene3D Endonuclease/exonuclease/phosphatase 73 178 IPR036691 -
Viun1g02016 550 Gene3D Endonuclease/exonuclease/phosphatase 274 535 IPR036691 -
Viun1g02016 550 SMART i5p_5 225 518 IPR000300 GO:0016791|GO:0046856
Viun1g02016 550 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 71 183 - -
Viun1g02016 550 Pfam Endonuclease/Exonuclease/phosphatase family 96 410 IPR005135 GO:0003824
Viun1g02016 550 SUPERFAMILY DNase I-like 83 520 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02016 Viun-Chr1 31605531 31610117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02016 124 486 Acyl Lipid Metabolism Gene Families AT2G43900 25.064 2.48e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02016 - - gmx:100803074 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02016 1 31605531 31610117 Viun1g02016 1 31605531 31610117 ECH
Viun1g02016 1 31605531 31610117 Viun7g01549 7 19954317 19958537 PCT