Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01543 ATGGCGACTTTGTCACATGCAAACTCTAGGAGAATGTATTCATGGTGGTGGGACAGCCACATAAGCCCCAAAAACTCAAAATGGCTCCAGGAAAATCTGACAGATATGGATGCCAAGGTGAAGCAAATGATTAAGCTTATTGAAGAAGATGCAGATTCTTTTGCAAGGAGAGCAGAAATGTATTATAAAAAACGGCCAGAGCTTATGAAAATGGTTGAAGAGTTTTACAGGGCATATCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTTATCCGCCATGCCCATAGGACCATGTCTGAGGCATTTCCTAATCAAGTTCCTATGATGCTGACAGATGATTTACCTACAGTTTCTCCTCCGGATACAGAGCCACACACTCCAGAAATGCGCCACTCTTCACGTTCCTTTCTTGATTCAGATGAACCACAAAAGGAGGCTTCTGCTCACTTCCATGTTATAAAAAAGAATGGTGGTTATTCTGGCGAACCTGATTCTTCTTTGAACAAAACAGGTTTGAAACAGCTCAATGATCTCTACATCCCTGGAGAACAGGAAAATCTTACACAGTTTGCAGAAAGGAATGCCAGAAGGGGGCTCAATTTTTTTGAGACACAGGAGAGTAGTGAGCTAAACAATGGAAGCAACAATACTAGGTCTCACATCTCGTCTGAGTCTGAACGTGTGACAAAGGCTGAGACAGAAATTTTGGCCTTGAAGAAAGCCATTGCCAAATTAGAGGAGGAAAAGGAAGCTGGCTTGCTTCAGTATCAACAGTGTTTAGAGAAGCTGTCTAATCTCCAGTTAGAATTGTCTAGCGCACAAGAGAATTCTAAAAGACTTGATGAGCGAACAAGTAAAGCTGAAGCTGAAGTTCAAGCCTTGAAGGAAACCCAAATTAAATTACAGGCTGAAAGTGAAGATAGTCTTCTTCAGTATCAGGAGTGCTTGGAGAAAATAGCAAAGCTAGAGGAAAATATTTCTTCTGCGCAGACAGAAGCCGGAGAACTTAATGAAAGAGCTAACAGAGCAGAAAATGAAACTGAGTCCCTAAAGCAGGACCTTGCTAGAGTAGAAGCTGAAAAGGAAACTATCATTGTTCAATATAAACATTGCTCGGAGACACTATCAAAGTTGGAGGAGAGATTAGACGAAGCCGAGGAAAATGCAAGAAGGACTAAGGAGCATGCCACTGTAGCTGAAAATGAAATTGGGGCCTTGAAACTACAAGTTACTAAACTTAATGAAGAAAAGGAAGAAGCTGCTCTCCGTTATCAGCAATGCTTGGAGATAATTTCCGGTCTGGAATATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGCTAAATTCCAAGATAGATGATGAGGTAGAAAAATTACAGAGTTCTGAGAAGAAGTGTCTTCTCTTGGAGACATCAAATCACAATCTGCAGTCTGAGTTACAATCTTTGGCACAACGAATGGGGTCTCAAAGTGAAGAACTTAATGAGAAGCAGAAAGAATTGAGTAGACTTTGGGGTTGCATGCAGGAGGAGAGATTGCGCTTCATTGAGGCTGAAACCGCTTTTCAAACTCTTCAGCAGTTACATTCTCAATCTCAGGAAGAGCTTAGATCTCTTGCTGCTGAACTTCACAGTAAAGTGGATACACTGGGGAACGTGGAATCACGTAAGCAGGCTTTAGAGGATGAAATACACAGGGTCAGTGAGGAAAACAAAATCCTAAATGAGGTCAAAATTTCTTCATCGTTGTCAATAAAAAATTTGCAGGATGAGATTTTGAATTTGAGGGAGACAATAAAGAAACTTGAACAGGAGGTGGAGCTGCGAATTGATGAAAGAAACGCACTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATCTGAATAAAAAACATGAAGCCATGATGGAGGAAGTCAGGTCAACTGACTTAGATCCACAATGCTTTGGACCATCTGTTAAAAAACTGCAAGATGAAAACTTAAAGCTGAAGGAAACATGTGAGGCTGACAAAGGAGAGAAAGAAGCTCTTTTGGCAAAATTGGAAACCATGGAGAAAATTCTGGAGAAAAATACTGTCTTAGAAAATTCCCTTTCAGACTTGAATGCTGAGCTGGATAGTGTCAGAGGAAAGGTAAATGTGTTGGAAGAAACATGTCAGTGTCTACTAGTTGAGAAATCCAATCTTGCTGCTGAGAAGGCCACCTTGTTTTCTCAGTTACAATCCACAACTGAAAAGCTGGAGAGGCTCTCAGAAAAGAGCAACCTGTTGGAAAATTCACTATTTGATGTGAATGCTGAACTTGAAGGGTTAAGGATGAAGTCCAGGGTGTTAGAAGATACATGCCAGTCACTTGACCATGAGAAGTCCAGTATCTTTCAAGAGAAAGAAACCTTAGTTTCACAGATGAACATCACTCATCAAACACTGAAAGATCTTGAGAAACTGCACAGTGAATTGGAGTCAAAGCATTTGGAACTAAAAGGAGAAAGAGAGTCTGCACTTAAAAAGGTAGAAGAACTTCTAGTTTCCCTATATTCTGAGAGGGAAGAGCATTCCAGAGTTTTGAAATTGAATGAAGATGAATTGGCTGAGAAGGAATTACAAATTCATATTCTACAAGAAGATAACAATTGCAAGAAAAAGGATTATGAGGAGGAACTGGACAGAACTATACATGCTCAAATTGAAATTTTCATCTTGCAGCAATGTATTGACGATCTGGAAAAAAAGAATTTCTCCATTCTGGTTGAGTGTCAGAGACTATTGGAGGCTTCCAAAATGTCAGACAGAATGATATCTAAATTGGAGACTGAGAATGTTCAAAAGCAGGTTGATGTGAATTCTCTGTCTGAGAAAATTAAAATACTAAGGGTTGGGTTGATTCAGGTGTTGAAGACTCTTGACTATAACAGTGGGCATTTCTGTGAAGATATGCTTGAAGAAGATCAAATGCTTTTGAACCAGATATATGAAAAACTTCAGGAGAGGCAGAAATCTTTTGACACAATTTTCAATGAAGGCCAAAAACTGGCCATTGAGAATTCAATTCTGATTACATTCCTTGAGCAGTTAAAACTAAAGGTAGAAAATCTAGTGACACAAAGAGATGACCTTGATGAGCAGTTCAGTATCCAGTCTCAGCGGTTTTTGGCGTTGCAAATAGAGGTTCAGAAGATACTGGAGAAGAACCAAGAGTTGAAGTTGACAATAAGCAAAGGAGAAGAGAGAATGGAAGTAATGACAGCTGAAATAGGCAACCTACAGAAGAAGCTGTCAGACATGGAAAAAAATCACAACAATTTACAGGAGGATAGTCACAAAATATTGGAAGAGAAGAAGTCCTTGATGAGAAGTTTTCTAGATCTGGGTGAAGCGAAAAGTAACTTGGAAGAAGAAATGTGTTTCATGATCCATGAGACAATAGCTCAGTCCAATATTTCCCTTATTTACGAGAATATTATCTTTGAAAAACTCCTGGAACTTAAAGAGCTAGGTGAGGATCTTGATAAACATTGTTCAGCAAATAATGACCTCAAGGAGAGATTAAAAGTTATGGTGGGAAAGTTAGAGAATGAAGAAATGGAAAATTCACATCTTAGAGAGTCATTTATAAAGTCAAATGTTGAACTGCATTTAGTTCAATCTATCAATGATGAATTAAGTTGTCAGATTAGGGATGAAAGGGAAATGTTGAATCAAAAGGAAAATGAGCTTTTGGAAGCCGCTGAGATGTTTCATGTTTTACATGCTGAGAAAACGGAATTGCAAAGAATGGTGGAAGATCTGAAGATTAAGTATGATGAAGCAAGGGTGACGCTCGAAGAACAGGCTAATCAAATTTTGAAATTGTCCTCAGACAAGGACCGTCAAGATGAAGAGGTAATTTGCCTGTGTGAAGTGAACCAGAAGTTGGAGTCTGAAATACGGCACCTACGTCAAGAGCTTGGAGAAACTAAACTGAGGGAAAATAAGCTAAGTTATGAAGTACTTGAGGGAAGAAATGAGATTGAACAATGGGAAACTCAGGCTTCAACACTCTTTGCTGAGCTGCAGATTTCTGCTGTCAATGGAACATTATTTGAAGGAAAGGTCTCTGAGCTAGCTGATGCTTGTGAGAATCTTGAACACAGAAACTACTCCAAAGACATGGAAAGCGAACATCTGAAAGAAAGAGTTAGCAAGCTGGAAATCGAAAATGGAAGACTATCTGGTCAATTAGCTGCTTATGGCCCTGCTGTCAGTGCTTTGAATGACAGTATAACAGCTCTGGAGATGCAGACTCTTGCACATGCAAAACCTGATGACTGTGAAGAAACAAAGGCTAAAGTATTGGTGGGTAATGAATTCACTGAAGATGGTCAACAAGCAGACCAAGATAAGACAGTTATGGCACCAGAGGCACTCCCTGGCTTCCAAGATATGCAGAGAAGGATCAATGCTATTGCAATGGTAGTAAAGCAGTTAAATGAAAGTTTCAAACTGAAGAATCAAACTAGAGAGATACAAGAGTTAAAATCTGGAAATACCCGGCATGGAGAGAATATTCAAGCAAGCAAGCATGTTACTCAAGACCAAGGAAAGACCCCGGTTACAGAGATTGAAGTTTTGCCTAAAGACATCATGCTAGATCAAATATCTGAATGTTCATCATATGGGATAAGTAGGAGGAGAGAAATTCTTGAGGCTGATGATCAGATGCTTGGGTTGTGGGAAACAGAAGATAAGGATGGCGCTGTTGGAAAGCAAGTTGAAAAGACACAAAGGATGGCTTCTGAAGTTGGAGGCAATCATCAAAGAGGAACAACCAAGGAACCCAAAAATAAATACCCTTCAAAAGATTCCTTGGTGGAAAAAGAGTTGAGTGTGGACAAGTTAGAGATCTCGAGAAGATTGACACTGCCACGGGATGAAGGGAACCAAACAAAGATTTTAGAGAGACTTGATTCTGATGCACAGAAGTTAACAAACCTTCAAATCACCGTACAAGATTTGATGAAGAAGGTAGTGGTTAATGAGAAGAACACAAAAGGAAAAGGTGTTGAGTTTGATGGAGTAAAAGGGCAACTTGAAGCATCCCAGGAAACCATCACAAAGTTGTTTGACACCAACAAGAAGTTGATGAAGAATGTGGAAGAGGGTACCTTGTCATCTGTCGGGAAGAGTGCAGGAGAGTCAAATGAAAGTGGAAGTGTCAGCAGAAGGAGAGTCTCGGATCAAGCAAGGAGAGAATCAGAAAAGATAGGACAACTGCATTTGGAGGTGCAAAGGTTACAGTTTCTACTGCTGAAACTTGGTGATGGAAAAGAAAGCAAAGAGAAAACGAAAAGCAGTGATCGAAGTCCAAGAGTGCTTTTGCGAGATTATCTTTATGGTGGGACGAGAAGCAACAACCAAAAGAAGAAAAAGCTACCATTTTGTTCATGTGTGCGACCTCCCACCAAGGGAGATTGA 5466 0.3996 MATLSHANSRRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMSEAFPNQVPMMLTDDLPTVSPPDTEPHTPEMRHSSRSFLDSDEPQKEASAHFHVIKKNGGYSGEPDSSLNKTGLKQLNDLYIPGEQENLTQFAERNARRGLNFFETQESSELNNGSNNTRSHISSESERVTKAETEILALKKAIAKLEEEKEAGLLQYQQCLEKLSNLQLELSSAQENSKRLDERTSKAEAEVQALKETQIKLQAESEDSLLQYQECLEKIAKLEENISSAQTEAGELNERANRAENETESLKQDLARVEAEKETIIVQYKHCSETLSKLEERLDEAEENARRTKEHATVAENEIGALKLQVTKLNEEKEEAALRYQQCLEIISGLEYKLSCAEEEVRRLNSKIDDEVEKLQSSEKKCLLLETSNHNLQSELQSLAQRMGSQSEELNEKQKELSRLWGCMQEERLRFIEAETAFQTLQQLHSQSQEELRSLAAELHSKVDTLGNVESRKQALEDEIHRVSEENKILNEVKISSSLSIKNLQDEILNLRETIKKLEQEVELRIDERNALQQEIYCLKEELNDLNKKHEAMMEEVRSTDLDPQCFGPSVKKLQDENLKLKETCEADKGEKEALLAKLETMEKILEKNTVLENSLSDLNAELDSVRGKVNVLEETCQCLLVEKSNLAAEKATLFSQLQSTTEKLERLSEKSNLLENSLFDVNAELEGLRMKSRVLEDTCQSLDHEKSSIFQEKETLVSQMNITHQTLKDLEKLHSELESKHLELKGERESALKKVEELLVSLYSEREEHSRVLKLNEDELAEKELQIHILQEDNNCKKKDYEEELDRTIHAQIEIFILQQCIDDLEKKNFSILVECQRLLEASKMSDRMISKLETENVQKQVDVNSLSEKIKILRVGLIQVLKTLDYNSGHFCEDMLEEDQMLLNQIYEKLQERQKSFDTIFNEGQKLAIENSILITFLEQLKLKVENLVTQRDDLDEQFSIQSQRFLALQIEVQKILEKNQELKLTISKGEERMEVMTAEIGNLQKKLSDMEKNHNNLQEDSHKILEEKKSLMRSFLDLGEAKSNLEEEMCFMIHETIAQSNISLIYENIIFEKLLELKELGEDLDKHCSANNDLKERLKVMVGKLENEEMENSHLRESFIKSNVELHLVQSINDELSCQIRDEREMLNQKENELLEAAEMFHVLHAEKTELQRMVEDLKIKYDEARVTLEEQANQILKLSSDKDRQDEEVICLCEVNQKLESEIRHLRQELGETKLRENKLSYEVLEGRNEIEQWETQASTLFAELQISAVNGTLFEGKVSELADACENLEHRNYSKDMESEHLKERVSKLEIENGRLSGQLAAYGPAVSALNDSITALEMQTLAHAKPDDCEETKAKVLVGNEFTEDGQQADQDKTVMAPEALPGFQDMQRRINAIAMVVKQLNESFKLKNQTREIQELKSGNTRHGENIQASKHVTQDQGKTPVTEIEVLPKDIMLDQISECSSYGISRRREILEADDQMLGLWETEDKDGAVGKQVEKTQRMASEVGGNHQRGTTKEPKNKYPSKDSLVEKELSVDKLEISRRLTLPRDEGNQTKILERLDSDAQKLTNLQITVQDLMKKVVVNEKNTKGKGVEFDGVKGQLEASQETITKLFDTNKKLMKNVEEGTLSSVGKSAGESNESGSVSRRRVSDQARRESEKIGQLHLEVQRLQFLLLKLGDGKESKEKTKSSDRSPRVLLRDYLYGGTRSNNQKKKKLPFCSCVRPPTKGD 1821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01543 1821 Coils Coil 1166 1200 - -
Viun7g01543 1821 Gene3D - 308 479 - -
Viun7g01543 1821 Gene3D - 682 859 - -
Viun7g01543 1821 Coils Coil 524 544 - -
Viun7g01543 1821 Coils Coil 552 579 - -
Viun7g01543 1821 Coils Coil 657 677 - -
Viun7g01543 1821 MobiDBLite consensus disorder prediction 206 230 - -
Viun7g01543 1821 MobiDBLite consensus disorder prediction 1594 1619 - -
Viun7g01543 1821 Coils Coil 370 425 - -
Viun7g01543 1821 Coils Coil 1306 1326 - -
Viun7g01543 1821 Coils Coil 230 362 - -
Viun7g01543 1821 MobiDBLite consensus disorder prediction 206 224 - -
Viun7g01543 1821 Coils Coil 937 957 - -
Viun7g01543 1821 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Viun7g01543 1821 Coils Coil 737 771 - -
Viun7g01543 1821 Coils Coil 853 880 - -
Viun7g01543 1821 Coils Coil 1026 1046 - -
Viun7g01543 1821 MobiDBLite consensus disorder prediction 1720 1752 - -
Viun7g01543 1821 Coils Coil 587 646 - -
Viun7g01543 1821 SUPERFAMILY Tropomyosin 398 646 - -
Viun7g01543 1821 Coils Coil 1257 1298 - -
Viun7g01543 1821 MobiDBLite consensus disorder prediction 1604 1619 - -
Viun7g01543 1821 Coils Coil 1222 1249 - -
Viun7g01543 1821 Coils Coil 688 722 - -
Viun7g01543 1821 MobiDBLite consensus disorder prediction 126 148 - -
Viun7g01543 1821 Coils Coil 433 467 - -
Viun7g01543 1821 MobiDBLite consensus disorder prediction 1720 1738 - -
Viun7g01543 1821 SUPERFAMILY Tropomyosin 217 421 - -
Viun7g01543 1821 Coils Coil 807 834 - -
Viun7g01543 1821 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Viun7g01543 1821 MobiDBLite consensus disorder prediction 1773 1787 - -
Viun7g01543 1821 MobiDBLite consensus disorder prediction 118 148 - -
Viun7g01543 1821 Coils Coil 1061 1116 - -
Viun7g01543 1821 MobiDBLite consensus disorder prediction 1773 1821 - -
Viun7g01543 1821 Coils Coil 475 502 - -
Viun7g01543 1821 PANTHER PROTEIN NETWORKED 4A 284 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01543 Viun-Chr7 19840628 19847924 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01543 - - gmx:100810726 2350.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01543 7 19840628 19847924 Viun7g01543 7 19840628 19847924 ECH
Viun1g02022 1 31639537 31646707 Viun7g01543 7 19840628 19847924 PCT