Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02022 ATGGCGGCTCTGTCCCATGCTGATTCTAGAAGAATGTATTCATGGTGGTGGGACAGTCACATTAGCCCCAAGAACTCGAAATGGCTCCAAGAGAATCTGACTGATATGGATTCCAAGGTGAAACATATGATCAAGCTTATTGAAGAAGATGCAGATTCCTTTGCAAGGAGGGCAGAAATGTATTATAAGAAACGGCCAGAGCTGATGAAATTAGTTGAAGAGTTTTATCGTGCATATCGGGCATTGGCGGAGAGATATGATCATGCAACTGGAGTGATTCGTCAGGCCCATCGGACCATGGCTGAAGCATTTCCTAATCAAGTGCCTCCTGCATCAGCAGATGATTCACCCGGAGTTTCTTACATGGAGACTGAGCCACATACACCAGAGACATTCACCTTCTCCCGTTCATTTCTTGACTCAGATGAATTGCAAAAGGATGCTTCAACTCATTTCCAATCCATAAAAAGAAATGGATCTTATACTGATGAAACTGATTGTGGTATAAGCAGAAAGGGTTTGAAACAGCTCAACGATCTATTTATGTCAGGAGATCATGCAAAGTCTTCAGAAGGGCGCGTTCGAAGGGGGCTCAATTTTCTTGACGTAGAAGAGATTAATGCGCAAGACAATGAAAGCCAAGATAGTAGGACTCAAGTCTTATCTGAGTCTGAACGGATGACAAAAGCTGAGACAGAAATTTTGGCCTTAAAGAAAGCCCTGTCTAACTTAGAAAGTGAAAAGGAGGCTGGCTTGCTTCAGTATCAGCAGAGTTTGGAGAGATTGTCTAATCTGGAATCAGAAATGTCTCGTGCAAGAGAGAATTCTCAAGGACTTAATGAACGAGCAAACATAGCTGAAGCTGAAGTTCAAACCTTGAAGGAAGCCCTTGATGAATTAGAGGCCGAAAGAGAAGTTAGTCTTCTTCAGTACCAGCAATGCTTGGAGAAAATATATAATCTGGAGAATCATATTTCTTCTGCCCAAAAGGATGTAGGAGAACTCAATGAACGAGCTAGTAGAGCTGAAACTAAAGCTGGATCCTTAAATCAAGACCTTGCTAGAGTAGAAGCTGAAAAGGAAGCTGCCCTTGCTCAGTATAAACAGTCCTTGGAGTTGTTGTCAAAACTAGAGGAGAAACTCGTACAAGCTGAAGAGAACGCAAGGATAATTAAAGAACAAGCTGATGATGCAAAAAATGAAATTGAAAGCATGAAGTTAGAAATTGCTAAACTTACTGCAGAGAAGCAAGATGCAGCTCACAGCTATCAACAATGCTTAGAGATAATTTCCAGTTTGGAGCATAAACTCTCTTGTGCCCAAGCGGAGGTGTATAAGCTAAACTGCAAGATAAATGATGGGGTTGAAAAGTTACATAGTTCTGAACAGAAGTGTTTTCTCTTGGAAACATCTAATCAGACTTTGCAATCTGAATTGCAGTCTTTTGCACAGAAGTTGGGATCTCAGGGTGAAGAACTTAGTGAGAAGCAGAAAGAATTGGGTAGACTCTGGACTTGCATACAAGAGGAGAGATTGCGGTTTATCGAGGCTGAAGCTGCTTTCCAAACTCTGCAGAATTTGCATTCTCAATCTCAGGAAGAACTAAGATCTCTTGCCACCAAGCTTCATGGTAAGGCTGAGATTCTGGAGAATATGGAATCCCATAAGCAGGCTTTAGAGGATGAAGCTCACAAGGTCAAAGTGGAAAACAAAACTCTAAATGAGCTTAAATTATCTTCATCTTTGTCTATAAAAAAAATGAAGGATGAGATAATAAATTTGAGGGAGATAATAAAGAAACTTGAACTGGAGGTTGGACTGCAGGTAGATGAAAGAAATGCTCTCCAGCAAGAAATTTACCATCTTAAAGAAGAGCTTAATGATGTGAAGAAAATACATGAATCCATGATGGAGGATGTCAGATCAACTGACTTAGATCCGCAGTGCTTTGCCTCTTCTGTGAAGAACTTGCAAGATGAGAACTCGAAGCTGAAGGAAAGATGTGAAACCTACAAAGATGAGAAAGCAGATCTAAAGGAAAAAGTGGAGACCATGGAGAATCTTTTAGAGAAGAATGCTGTTTTGGAGAGGTCTCTTTCAGATTTGACTGTGGAGCTTGAGAATGCTAGAGGAAGGGTAAAGGTATTGGAACAAACTTGCGAATCTTTTCTTGGGGAGCAAGCCACTCTTGCTGCTGAGAAAGCCACCCTGTTTTCTCAGTTACAAACCACAGCTAAGCAGCTGGAGAAGCTCTCAGAAAAAAACAACCTTTTAGAAAATTCACTATGTGACGTGAATGCTGAGCTCGAAGGATTAAGGATAAAGTCAAAGATTTTAGAAGACTCTTGTATGTTGCTAGATCATGAGAAGTCCAGTCTAAACTCTGACAAAGAAACCTTGGTTTCACAATTCAACATCACTCATCAAACTCTGAAAGATCTTGGGAAACAACACAGTGAATTGGAACTGAAGCATTCTGAACTGAAAGCAGAAAGGGAATCTGCACTTCTAAAGTTGGAAGAGCTACTTGTTTCCTTATATGCTGAGAGGGAAGAACATTCCAGAATTGTGCAATTGCATGAATGTCACTTGGCTGAGAAGGAATTACAAATCTTTGTTCTCCAAGAAGATGCAGATTACCAGACAAAAGAGTATGAAGAGGAAATGGACAGATCTGTACATGCTCAAATGGAAATATTCATCTTGCAGAGATGTATCCAGGATTTGGAGCAAAAGAACTTCTCCCTTCTAGTTGAGTGTCAGGGACTCTTGGAGGCTTCCAAACTGTCTGATAGATTGATATCTAAATTGGAGAATGACAACACTCAGAAGCAAGTTGATGTTAATTCATTGTCTGAGAAAATTAAAATACTCAGGATCGGGCTCCTTCAGGTGTTGAAGGCTCTTGATGTTAACAGCGAGCCTTGGTGTGAAAATATGATTGAAAAGGACCAGGAGCTTCTGAACCACGTACATGGCAAAATTCAAGAGACACAAAGTTCTTTTGTCACAATTTTCAATGAAAGCCAGCAAGTGGCCATTGAAAATTCAGTTCTTGTTACATTCCTTGGCCAGTTGAAATTAGAGGCTGAAAATCTTTTGACGGAAAGAAATTCCCTAGACAAGGAGTTGAGAACCCAGTCTACACAGTTCTTGATAATGCAGGCAGAAGTACAAAAGATAATGGAGAAGAATCAGGAGTTGAAGTTGACAATAAGGAAAGGAGAAGAAAAAATGGAAGTAATGGCTACTGAAATAGACAATTTATGCAAACAGCTGTTAGATTTGAAAGAGGATCACCAAAACATAAAGGAAGAAAGTTGCAAAACCTTTGAAGAGAAAAATTCCTTGATGAGAAGATTTATGGACCTGGGTGAAGAGAAAAGTAAGATGGAAGATGAAATCTGCATTATGATTCATGAGACAATCACACAATCTAATCTCTCGCTGGTCTACCAGAACATTGTCTTCGAAAAACTCCTGGCACTTAAAGAGCTAAGCAACAATCTCGATAGACTTTGTTCTGTAAATACCAACATCGAGGAGAAACTAAAAATACTGATGAACAAAATAGAAGATGTACAAATGGAAAATTCCGATCTTAGAGAGTCCTTTGCAGCGTCAAGCATTGAACTAAAATTGGTTCAATCGGTCAATGATCAGTTAAATTGTCAGATTAGGAATGGAAAACAATTGTTGTCTCAAAAGGAAAATGAGTTTTTGGAAGCAGCAGAGATGCTTAGCACTTTACATGATGAGAAAACAGAATTACAAAGATTGGTGGAAGTTCTGAAGAGTAAGTATGATGAAGCCAGGGTGATACTTGAAGAACAAGCTAGTCAAATTTTAAAATTATCCTCCGACAAGGATCGACAAAATGAAGAGCTTGGATGCCTTGGTGAAGTGAATCAGAAGTTGGAGGCAGAAATGAAGCACCTGCGCCAAGAACTTGGAGAAATTAAAGTGAGGGAAGAGAAGCTAAGTCATGAACTACTCAAGGGAACAAATGAGATTAAACAATGGGAAACTCAGGCAGCCACACTCTATACTAGACTGCAGATTTCTGCCGTCAATGAAACATTATTTGAAGAGAAGGTGCGCGAGCTAGCTCATGCATGTGAAGATCTTGAACGCAGAAGGAACTTCAAAGATATGGAAAGTGAAATGCTGAAAGAAAGAGTTTGCAAGTTGGAAGGTGAAAACGGGAAGCTTCGGGTTCAGTTGGCTGCTTATGTCCCTGCTGCCAGTGCTCTGAATGACTGCATAACATCCTTGGAGATGCAAACACTTGGGCATGCAAAACCACATGAAGACAAAGTATCAAAGGTTAAAGGTTTGGCGTTTCACAAGTACAATGAAGGTGGTCAACAAACAGGTGAACATCAGAATGCTGCGGCAATAGATGCACTTCCAGATTTCCAAGACATGCAGAAAAGAATCAACGTAATTGAAACGGCTGTTAAACAGATGAATGAAAGTTTCAAAACTAAGGATGAAATGAGAGAGATTCAAGTGTTAAAATCTGGATTCAGCTGGCGCCAAGGAAATATTCAAGCAAGTAAGTATGCTACTGAAATGCATGATACGAAGGGGCATCGGGGTGGACCTTCTGATGAACTGAAATCAAAGAGATCAGTGTCAGATGTCCCTGTAGCAGAAATTGAAGTTCTGCCAAAAGACATCATGCTTGATCAAACGTCTGAATGTTCATATGGGATAGGTAGGAGAGGAACTCTTGAGACTGATGATCAGATGCTCGAATTGTGGGAAACTGCTAACAAGGATGGCGTTATTGGACTGACAGTTGGAAAGGCGCAGAAGACAGCCATTGTGCCTACTGGATACCAACAAAAGAGAGCAACCAAGGAACTGAGAAACAAATATCCATCCGTAGAGTCCTTGATTGAGAAGGAGTTGAGTGTGGACAAATTAGAGATCTCAAGAAGATTGACACTGCCACATTCACATGAAGAAGGCAACAGGAGGAAGATTTTAGAAAGACTAGATTCTGATGCTCAAAAGTTGACCAACCTTGAAATTACCGTGCAAGATTTGATGAGCAAGCTAGAAATTACTGAGACCACAAAGGGAAAAGGTATTGAGTTGGATACGGTGAAAGGGCAGCTTGAAACTACCCAGGAAGCCATCACAAAGTTGTTTGATGCCAACGACAAGTTGAAGAAGAATGTAGAAGAGGGTACTTCATCCTTTGCTGCGAAGTATACAGCAGAATCAAATGAGAGTGGAAGTGCCAGCAGGAGGAGAGTTTCAGAACAGGCTCGGAGAGGGTCTGAAAAGATAGGTCGGCTGCAGTTGGAGGTGCAAAGACTGCAATTTTTACTTCTGAAGTTGAATGATGAAAAAGAAGGCAAAGGAAAGACAATGATAGATGAACGAAATTCAAAAGTCCTTTTGCGAGACTATCTCTATGATGGGACGAGAAGAAACTACCAGAAAAAGAAGAAGAAAGCACCCTTTTGTGCATGCATGCAGCCTCCCACTAAGGGAGATTAA 5514 0.4052 MAALSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDSKVKHMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQVPPASADDSPGVSYMETEPHTPETFTFSRSFLDSDELQKDASTHFQSIKRNGSYTDETDCGISRKGLKQLNDLFMSGDHAKSSEGRVRRGLNFLDVEEINAQDNESQDSRTQVLSESERMTKAETEILALKKALSNLESEKEAGLLQYQQSLERLSNLESEMSRARENSQGLNERANIAEAEVQTLKEALDELEAEREVSLLQYQQCLEKIYNLENHISSAQKDVGELNERASRAETKAGSLNQDLARVEAEKEAALAQYKQSLELLSKLEEKLVQAEENARIIKEQADDAKNEIESMKLEIAKLTAEKQDAAHSYQQCLEIISSLEHKLSCAQAEVYKLNCKINDGVEKLHSSEQKCFLLETSNQTLQSELQSFAQKLGSQGEELSEKQKELGRLWTCIQEERLRFIEAEAAFQTLQNLHSQSQEELRSLATKLHGKAEILENMESHKQALEDEAHKVKVENKTLNELKLSSSLSIKKMKDEIINLREIIKKLELEVGLQVDERNALQQEIYHLKEELNDVKKIHESMMEDVRSTDLDPQCFASSVKNLQDENSKLKERCETYKDEKADLKEKVETMENLLEKNAVLERSLSDLTVELENARGRVKVLEQTCESFLGEQATLAAEKATLFSQLQTTAKQLEKLSEKNNLLENSLCDVNAELEGLRIKSKILEDSCMLLDHEKSSLNSDKETLVSQFNITHQTLKDLGKQHSELELKHSELKAERESALLKLEELLVSLYAEREEHSRIVQLHECHLAEKELQIFVLQEDADYQTKEYEEEMDRSVHAQMEIFILQRCIQDLEQKNFSLLVECQGLLEASKLSDRLISKLENDNTQKQVDVNSLSEKIKILRIGLLQVLKALDVNSEPWCENMIEKDQELLNHVHGKIQETQSSFVTIFNESQQVAIENSVLVTFLGQLKLEAENLLTERNSLDKELRTQSTQFLIMQAEVQKIMEKNQELKLTIRKGEEKMEVMATEIDNLCKQLLDLKEDHQNIKEESCKTFEEKNSLMRRFMDLGEEKSKMEDEICIMIHETITQSNLSLVYQNIVFEKLLALKELSNNLDRLCSVNTNIEEKLKILMNKIEDVQMENSDLRESFAASSIELKLVQSVNDQLNCQIRNGKQLLSQKENEFLEAAEMLSTLHDEKTELQRLVEVLKSKYDEARVILEEQASQILKLSSDKDRQNEELGCLGEVNQKLEAEMKHLRQELGEIKVREEKLSHELLKGTNEIKQWETQAATLYTRLQISAVNETLFEEKVRELAHACEDLERRRNFKDMESEMLKERVCKLEGENGKLRVQLAAYVPAASALNDCITSLEMQTLGHAKPHEDKVSKVKGLAFHKYNEGGQQTGEHQNAAAIDALPDFQDMQKRINVIETAVKQMNESFKTKDEMREIQVLKSGFSWRQGNIQASKYATEMHDTKGHRGGPSDELKSKRSVSDVPVAEIEVLPKDIMLDQTSECSYGIGRRGTLETDDQMLELWETANKDGVIGLTVGKAQKTAIVPTGYQQKRATKELRNKYPSVESLIEKELSVDKLEISRRLTLPHSHEEGNRRKILERLDSDAQKLTNLEITVQDLMSKLEITETTKGKGIELDTVKGQLETTQEAITKLFDANDKLKKNVEEGTSSFAAKYTAESNESGSASRRRVSEQARRGSEKIGRLQLEVQRLQFLLLKLNDEKEGKGKTMIDERNSKVLLRDYLYDGTRRNYQKKKKKAPFCACMQPPTKGD 1837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02022 1837 Coils Coil 1219 1239 - -
Viun1g02022 1837 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Viun1g02022 1837 Coils Coil 934 954 - -
Viun1g02022 1837 Gene3D - 225 395 - -
Viun1g02022 1837 Coils Coil 1373 1393 - -
Viun1g02022 1837 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Viun1g02022 1837 Coils Coil 1767 1787 - -
Viun1g02022 1837 Coils Coil 811 838 - -
Viun1g02022 1837 Coils Coil 654 719 - -
Viun1g02022 1837 Coils Coil 1163 1204 - -
Viun1g02022 1837 MobiDBLite consensus disorder prediction 1741 1765 - -
Viun1g02022 1837 SUPERFAMILY Tropomyosin 203 443 - -
Viun1g02022 1837 PANTHER PROTEIN NETWORKED 4A 281 383 - -
Viun1g02022 1837 Coils Coil 542 576 - -
Viun1g02022 1837 Coils Coil 1058 1106 - -
Viun1g02022 1837 Coils Coil 1709 1729 - -
Viun1g02022 1837 Coils Coil 1247 1267 - -
Viun1g02022 1837 Coils Coil 741 761 - -
Viun1g02022 1837 Coils Coil 1114 1134 - -
Viun1g02022 1837 Coils Coil 1675 1695 - -
Viun1g02022 1837 Coils Coil 227 247 - -
Viun1g02022 1837 Coils Coil 255 422 - -
Viun1g02022 1837 Coils Coil 1023 1050 - -
Viun1g02022 1837 Coils Coil 1275 1330 - -
Viun1g02022 1837 Coils Coil 584 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02022 Viun-Chr1 31639537 31646707 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02022 - - gmx:100810726 2887.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02022 1 31639537 31646707 Viun1g02022 1 31639537 31646707 ECH
Viun1g02022 1 31639537 31646707 Viun7g01543 7 19840628 19847924 PCT