Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01530 ATGGAACCCAAGTTCACAGTGAATTGTGACCGAAACGAGTCGCTCAAAACCAGAACTGGTACTCATTTGCCAGAGAGCCCAAGAGTACCAATGGAGTTTCTGTCAAGATCATGGAGTGCCTCTGCTCTTGAGGTCTCCAAAGCCCTTGCACCACCACCACCACCTCCTTCTTATTACATACCTTCCAAGCCTCCCATTATACCCTCTTCTATCACCAACTCCATTTCCGAAGAAACTTCTTCTGCTAAGTCAGAGGAGTTCTCAGCCACCATGTGCGCCAACCAGTTCTCTTTTGCTTCCTCCGCCACTTCACAGCTCGTCCTTGACCGCATTATGTCACAGTCAACTAGAGAGGAAGTGTCTCCATTAACGTCAGGGAGATTGTCCCACAGCAGTGAACCTTTGAACGGTGGTGCTTCTTTAACTGGAACGGACAGTCCACCAATCTCTCCTTCTGACGAGTTTGACGATGTTGTCAAGTTTTTTCGGGCAAACAACTCCATTCATCCCTTATTCAATGGTGGACGAGCCATGAGTGGTGGTACAGGGAATGCCACTCCTTGTTCCGGACCTAAAACAGTAGGAAGATGGTTGAAAGAAAGAAGAGAAAAGAAGAAAGAAGAAAACAGAAGCCATAATGCTCAACTTCATGCTGCAGTTTCTGTTGCCGCCGTAGCAGCTGCAGTTGCAGCTGTCACTGCCGCAACGGCAGCCACTTCTGCAGCTAGCAAGGATGAGAAGATGGCCATGTCCGTTGCTTCTGCGGCCACTTTAGTCGCTGCTCAGTGTGTAGAGGCTGCTGAAGCCATGGGAGCTGAGAGAGATCACCTTGCTTCTGTCGTTAGCTCTGCCGTCAATGTCCGTTCTCATGATGATATTTCAACACTTACAGCTGCAGCTGCCACAGCTCTACGTGGGGCAGCAACCTTGAAAGCAAGAGCATTGAAGGAGGTGTGGAATATTAACGCAGTGACTCCATTAGAGAAAGGAGCAGGTATTGGAAAATGTGGTAAAAGCAAAAACAGTAATTCTAGCACCAGTGACAGTGGGGAGATTATGAATGGTGAAAATTTGTTGGGTGCATGCAACCAAGAGTTCCTTGCTAGGGGCACTGCATTACTCAAACGGACACGCAAAGGTGATCTTCACTGGAAAATAGTTTCGGTTTATATACATCGAACAGGCCAGGTAATGCTGAAAATGAAGAGCAGACACGTTGCAGGAACTATCACGAAAAAGAAAAAGAATGTGGTGTTGGATGTGTGCACAAATTTAGCAGCATGGCCAGGACGGGACCTGGTTGATGAAGGTGAAGAAAGAAGGTACTTTGGATTGAAAACAGAAGCAAGGGGAGTTGTGGAGTTTGAATGCAGAAATCAAAGAGAATATGATATTTGGACTCAAGGGGTTTCTAGACTTCTTTCCATAGTTGCACGCAGACAAAACCTAACCTAA 1455 0.468 MEPKFTVNCDRNESLKTRTGTHLPESPRVPMEFLSRSWSASALEVSKALAPPPPPPSYYIPSKPPIIPSSITNSISEETSSAKSEEFSATMCANQFSFASSATSQLVLDRIMSQSTREEVSPLTSGRLSHSSEPLNGGASLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRAMSGGTGNATPCSGPKTVGRWLKERREKKKEENRSHNAQLHAAVSVAAVAAAVAAVTAATAATSAASKDEKMAMSVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDISTLTAAAATALRGAATLKARALKEVWNINAVTPLEKGAGIGKCGKSKNSNSSTSDSGEIMNGENLLGACNQEFLARGTALLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCTNLAAWPGRDLVDEGEERRYFGLKTEARGVVEFECRNQREYDIWTQGVSRLLSIVARRQNLT 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01530 484 PANTHER EXPRESSED PROTEIN 19 478 IPR040269 -
Viun7g01530 484 Pfam Auxin canalisation 24 330 IPR008546 -
Viun7g01530 484 MobiDBLite consensus disorder prediction 1 27 - -
Viun7g01530 484 MobiDBLite consensus disorder prediction 1 18 - -
Viun7g01530 484 MobiDBLite consensus disorder prediction 117 153 - -
Viun7g01530 484 Pfam Plant pleckstrin homology-like region 373 477 IPR013666 -
Viun7g01530 484 MobiDBLite consensus disorder prediction 117 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01530 Viun-Chr7 19713195 19717027 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01530 - - gmx:100782024 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01530 7 19713195 19717027 Viun7g01530 7 19713195 19717027 ECH
Viun1g02031 1 31697621 31701459 Viun7g01530 7 19713195 19717027 PCT