Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02031 ATGGAGCCAAAGTGCACCATAAACTGTCGCCGCTCGGAGTTCGTTCCGACCCCTCTGCCGGAGAGTCCTCGAGTGCCTATGGAGTTTCTGTCACGCTCATGGAGTGCCTCTGCTCTTGAGGTCTCCAAAGCTCTTTCACATCACCACTCCTCTCTCTCCTCTTCTTGCATGCCTAATTCAAACAACACTTCCATTCCGGAAGAAACTGTTCCCAACCACACCAACACCAACGCCTTTCTCTCTGAAGATTTCTCCACCATGTCCAAGAATCAGTTCTCTTTTGCTTCCTCTGCCACCTCTCAGCTCGTCCTTGAACGCATTATGTCCCAGTCCACAAGAGAGGAAGTGTCTCCGTTAACCTCGGGTAGGTTATCTCACAGCAGCGAGCCTTTGAATGGAGGTGGTTCCTTAACCGGAACAGATAGCCCTCCGATTTCACCTTCAGATGAGTTTGATGACGTTGTTAAGTTCTTTCGGGCAAATAATTCCATTCACCCTTTGTTCAATGGTGGACGAGCCAGTGCAACTATTGGCAACGGCACGGCAAGCTCAGGACCAAAAACTGTTGGAAGATGGTTAAAGGACCGAAGAGAGAAGAAGAAAGAAGAAAACAGAACCCATACTGCTCAGCTGCATGCCACTATTTCAGTGGCTGCAGTGGCTGCTGCCGTTGCAGCTATTGCGGCTGCAACAGCAGGCTCGTCTGCTCCCAGCAAGGATGAGAAGATGGCAAAGACTGACATGGCTGTTGCTTCTGCCGCCACATTAGTTGCTGCACAGTGTGTAGAGGCTGCAGAAGCTATGGGGGCCGACCGTGACCACCTTGCTTCTGTCATCAGCTCTGCTGTCAATGTCCGTTCTCATGATGATATTACTACTCTTACAGCTGCAGCTGCCACAGCTCTACGAGGAGCGGCAACCTTGAAAGCAAGAGCTTTGAAGGAGGTATGGAATATAGCCACAGTAACACCACTGGAGCGAGGTATAGGGGGGATTGGACTATGTGGTAAAAGTATTAACAGTAACACTAGCAACACCAGCACCAGTGATAGCGGGGAAGTTTTCAATGGAGAAAATTTTCTAGGTGCCTGCAGCCAAGAGCTTATTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGGTGATCTTCACTGGAAAATAGTGTCTGTCTATATACATCGAACCGGCCAGGTAATGCTGAAAATGAAGAGCAGACATGTGGCAGGAACAATTACCAAAAAGAAAAAGAATGTTGTGTTAGATATCTGCACGGATTTACCAGCATGGCCAGGGAGACATCTGTTTGATGATGGTGAAAAGCGACGCTACTTTGGATTGAAGACAGACCAAAGGGGGATTGTGGAGTTTGAGTGTCGAAATCAACGAGAATATGACATCTGGACGCAAGGGGTTTCGAGACTACTCTCCATTGTAGCACAGAGGCAAAACAGATATGGGAATTGA 1467 0.4847 MEPKCTINCRRSEFVPTPLPESPRVPMEFLSRSWSASALEVSKALSHHHSSLSSSCMPNSNNTSIPEETVPNHTNTNAFLSEDFSTMSKNQFSFASSATSQLVLERIMSQSTREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASATIGNGTASSGPKTVGRWLKDRREKKKEENRTHTAQLHATISVAAVAAAVAAIAAATAGSSAPSKDEKMAKTDMAVASAATLVAAQCVEAAEAMGADRDHLASVISSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIATVTPLERGIGGIGLCGKSINSNTSNTSTSDSGEVFNGENFLGACSQELIAKGSELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDICTDLPAWPGRHLFDDGEKRRYFGLKTDQRGIVEFECRNQREYDIWTQGVSRLLSIVAQRQNRYGN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02031 488 Pfam Plant pleckstrin homology-like region 374 479 IPR013666 -
Viun1g02031 488 PANTHER EXPRESSED PROTEIN 16 480 IPR040269 -
Viun1g02031 488 MobiDBLite consensus disorder prediction 112 145 - -
Viun1g02031 488 MobiDBLite consensus disorder prediction 112 150 - -
Viun1g02031 488 Pfam Auxin canalisation 20 327 IPR008546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02031 Viun-Chr1 31697621 31701459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02031 - - gmx:100805743 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02031 1 31697621 31701459 Viun1g02031 1 31697621 31701459 ECH
Viun1g02031 1 31697621 31701459 Viun7g01530 7 19713195 19717027 PCT