Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01515 ATGAGGACTTTCTTCACAGCGGAATCATGTAAAGAAGCACATCCTAATGCTTTAAATCCACAATCCTGGCTCCAAGTTGAAAGAGGCAAGCTTCCCAAGTTGTCATCGCAGTCCTCATCTTCATCAATAGAATCTCTAATCAAGGTCCCACAGCCACCTATACTCCCATTCTTCAAGCCTGTCGATTATGTGAAATTTTTGGCTCAAATTCATGAAGAACTTGAGCTCTGCTCTCCGCAGGAGCAGTCAAATCTGTTTTTGTTACAGTACCAGGTCTTTAGGGGCATGAGGGATGTTAAACTGATGCGAAGAAGCCTCCGGTCAGCTTGGCAGAGAGCAAACACTGTTCATGAGAAGATTATATTTGGAGCATGGCTCAAGTATGAGAAGCAAGGGGAAGAATTAGTTGCTCAGTTGCTAACAGCTTGTGGTAAATGTGAAAGGGAATTTGAACCCATAGATGTAGAATCTCATATTTCTTTTGACAAAGTTATAATATCCCAGGATAGAGTTTCCATGAATGGGAACCACACTTCACAATATGTAATCTTTACAATCGGAGATGAGAAGATAGTCTGTGATAGACAAAAGATTTCTGAACTTTCAGCACCATTTCATGCCATGCTGAAGGGGTGTTTCAGGGAATCGCTTTCTGAGACCATCGATTTGTCTGAAAACAACATCTCTCCTTCAGGTATGAGGGCAATAAACTATTTTAGCTTGACTGGAAGTTTGCTTGATGTCCCTCAAAATCTTTTGGTGGAGATATCAGTTTTTGCAAACAAGTATTGTTGCGAAAGACTAAAACTGGCTTGTGATAGAAAACTTGCATCCTTAGTTTCCTCCAGAGAAGATGCATTGGAACTCATGGAATATGCTGTGGACCAGAATTCATCCGTGCTTGCGGCTTCTTGTGTACAAGTTCTTTTACGCGACATTCCCAACTGCTTGAGTGACAATAGGGTTGTGGAGTTATTTATTCATGCCAATAGGAAGGAGTTGGAAGTGATGGTTGGGCCTGGTATATTTGCACTTTTTTGTTTCTTAAGCGAAGTTTCTATGAACCTTAGTTCTAGTTCGGACACAACAGCTCATTTCCTGGAACGGTTGGTAGATTTTGCTGAAAATGACATGCAGAGAATGGTGGCATTTCATGAATTGGGATGTGCAAGGCTTTCAAGGAAAGAATATGATGAAGCCTATGGTGTTTTTGAGAGGGCTGCAAATGCAGGCCATATTTATTCCGTTGCAGGTTTAGCTAGAGTGGACTCTATAAAGGGTGAGAAGCTTTTACCTTATCAGAAGATAAGCTCAGTCATTTGTTCTGGCACTCCACTTGGATGGATGTACCAGGAAAGATCACTGTACTGTGATGGTGATGTGAGGTGGAAAGACCTTGAGAAAGCAACTGAACTGGACCCGACTCTTGTATATCCCTACATGTATAGGTCTGCCACTTTAATGAGGACAGAAAATGTTGAAGGTGCATTGTCTGAAATCAACCGGATTCTTGGCTTCAAACTTTCATTAGAATGCTTGGAACTACGGTTTTTCATCTATCTGGTCCTTGAGGACTACAAAGCAGCGCTTCGAGATGTTCAAGCAATTCTTACCCTGTGTCCATCTTATAAAATGTTTGAAGGGCGTGTAGCTGCATCTCAGCTCTGTACTCTTGTGCGTGAGCATGTTGAACATTGGACAACCGCAGATTGTTGGGCACGATTATATGACTGTTGGTCTGCTGTTGATGATATCGAGTCTCTTTCTGTCATCTACCAGATGCTTCAATCTGATGCCGCCAAAGGTGTTCTATACTTCAGACAGTCGTTGCTTCTCCTGAGGCTAAGCTGTCCTGAGGCAGCCATGAGGAGTTTACAGTTAGCTTGGGAACATGCATCAAGTGAGCACGAAAGGCTTGTGTATGAGGGGTGGATCTTGTATGATTCAGGACATTACGAAGAAGGGATCCAAAAAGCTGAAGAGTCTATTGCTATTAAAAGGTCTTTTGAGGCCTACTTCCTAAAAGCCTATGCATTGGCTGACTCTAGTGTAGATTCATCATGTTCTTCAACTGTGATTTCACTTCTGGAAGATGCCTTGAAGTGTCCTTCGGATAATCTGCGCAAGGGTCAGGCTCTGAACAACCTTGGGAGTGTTTATGTTGATTGCGGGAAACTAGAGGCAGCAGAAGATTGCTATGTGAAGGCCCTTAAAATCCAGCACACGCGAGCCCATCAGGGTCTTGCTCGTGTTCATTTTCTGAGAAATGACAAGGGTGCTGCTTTGAAGGAAATGACGAATCTTATTGAGAAGGCAAGAAACAATGCTTCAGCTTACGAGAAGAGGTCTGAATATGGTGATCGTGAACTCACAAAGGCTGATCTGGAGATGGTCACTAGATTAGACCCTCTTCGGGTGTATCCTTATAGATATCGAGCAGCAGTTTTGATGGACAACCACAAGGAAGAGGAAGCCATTGCTGAACTCTCCAGAGCAATTGCATTTAAAGCTGATTTGCATCTGCTGCATCTGCGTGCAGCTTTCCATGAACACAAGGGAGATGTCTTAAGTGCTTTGAGAGATTGTCGTGCTGCACTCTCTGTGGATCCAAATCATCAGAAAATGTTGGAACTTCACTGTCGTGTTAATAGTCACGAGCCATGA 2664 0.4298 MRTFFTAESCKEAHPNALNPQSWLQVERGKLPKLSSQSSSSSIESLIKVPQPPILPFFKPVDYVKFLAQIHEELELCSPQEQSNLFLLQYQVFRGMRDVKLMRRSLRSAWQRANTVHEKIIFGAWLKYEKQGEELVAQLLTACGKCEREFEPIDVESHISFDKVIISQDRVSMNGNHTSQYVIFTIGDEKIVCDRQKISELSAPFHAMLKGCFRESLSETIDLSENNISPSGMRAINYFSLTGSLLDVPQNLLVEISVFANKYCCERLKLACDRKLASLVSSREDALELMEYAVDQNSSVLAASCVQVLLRDIPNCLSDNRVVELFIHANRKELEVMVGPGIFALFCFLSEVSMNLSSSSDTTAHFLERLVDFAENDMQRMVAFHELGCARLSRKEYDEAYGVFERAANAGHIYSVAGLARVDSIKGEKLLPYQKISSVICSGTPLGWMYQERSLYCDGDVRWKDLEKATELDPTLVYPYMYRSATLMRTENVEGALSEINRILGFKLSLECLELRFFIYLVLEDYKAALRDVQAILTLCPSYKMFEGRVAASQLCTLVREHVEHWTTADCWARLYDCWSAVDDIESLSVIYQMLQSDAAKGVLYFRQSLLLLRLSCPEAAMRSLQLAWEHASSEHERLVYEGWILYDSGHYEEGIQKAEESIAIKRSFEAYFLKAYALADSSVDSSCSSTVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLEAAEDCYVKALKIQHTRAHQGLARVHFLRNDKGAALKEMTNLIEKARNNASAYEKRSEYGDRELTKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLSALRDCRAALSVDPNHQKMLELHCRVNSHEP 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01515 887 Coils Coil 755 782 - -
Viun7g01515 887 SMART BTB_4 180 280 IPR000210 GO:0005515
Viun7g01515 887 Gene3D Tetratricopeptide repeat domain 775 885 IPR011990 GO:0005515
Viun7g01515 887 PANTHER ETO1-RELATED 1 886 IPR044631 GO:0010105
Viun7g01515 887 SUPERFAMILY TPR-like 693 880 IPR011990 GO:0005515
Viun7g01515 887 Pfam Tetratricopeptide repeat 711 741 IPR001440 GO:0005515
Viun7g01515 887 SUPERFAMILY POZ domain 182 277 IPR011333 -
Viun7g01515 887 Gene3D Tetratricopeptide repeat domain 361 549 IPR011990 GO:0005515
Viun7g01515 887 Gene3D Potassium Channel Kv1.1; Chain A 175 319 IPR011333 -
Viun7g01515 887 Gene3D Tetratricopeptide repeat domain 597 772 IPR011990 GO:0005515
Viun7g01515 887 SMART tpr_5 510 543 IPR019734 GO:0005515
Viun7g01515 887 SMART tpr_5 636 669 IPR019734 GO:0005515
Viun7g01515 887 SMART tpr_5 381 414 IPR019734 GO:0005515
Viun7g01515 887 SMART tpr_5 710 743 IPR019734 GO:0005515
Viun7g01515 887 SMART tpr_5 839 872 IPR019734 GO:0005515
Viun7g01515 887 ProSiteProfiles TPR repeat profile. 710 743 IPR019734 GO:0005515
Viun7g01515 887 SUPERFAMILY TPR-like 382 739 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01515 Viun-Chr7 19664099 19668248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01515 711 871 Glycosyltransferase AT3G04240 26.901 2.95e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01515 - - gmx:100785039 1570.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02034 1 31709103 31716611 Viun7g01515 7 19664099 19668248 PCT