Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02034 ATGAGGAGTTTCTTCCCTGCAGAATCCTGTAAAGAGACGCACCCAAATGCTTTGAATCCTCAGTCTTGGCTTCAAATTGAAAGAGGGAAACTTCCCAAGTTGTCATCGTACCCTTCCTCTGCCTCAATAGAATCTCTGGTCAAGGTTCCTCAGCCAGCTGTACTGCCTTTCTATAAGCCTGCTGATTATGTGGAAGTTTTAGCACAAATCCATGAAGAGCTTGAGTCTTGTCCACCACAAGAGCGGTCGAATCTGTTTTTGTTACAATACCAGGTCTTTAGGGGCCTTGGGGAAGTTAAACTGATGCGTAGAAGCCTTCAGGGAGCCTGGCAGAGAGCCAACACTGTTCATGAGAAGATTATATATGGGGCATGGTTGAAATATGAGAAGCAAGAGGAAGAACTAATAGCGGACTTGCTTGCCAATTGTGGTAAATGTGCGAAGGAGTTTGCACCTGTAGATATAGCATCTCATCTTCCATTTGATGTAAATGTAAGTTCTGTGGGGAGAATGACCAATGAGAACCGCATTTCTCAAAATGTTACTTTTACAATTGGCGATGAAGAGATAGTTTGTGATAGACAAAAAATTTCTGAACTTTCGGCACCATTTAATGCTATGCTAAAGGGGTATTTCAGCGAATCACGTGCTGAGACTATAGATTTGTCTGAAAATAATATCTCTCCATTAGGTATGAGGGCAATAAGTATTTTCAGCTTGACTGGCAGTTTAATTGAGGTCCCTCCAAATCTTTTATTGGAGATATTAGCTTTTGCAAATAAGTATTGTTGTGAAAGACTTAAAGATGCTTGTGATAGAAGACTTGCATACTTGGTTTCCTCCAAAGAAGATGCTGTAGAGCTCATGGAATATGCTCTTGATGAGAATTCAACTGTACTTGCTGCATCCTGTTTACAAGTCCTTTTGCGTGATCTTCCAAACTGTTTGAATGACAGTCGGGTAGTGGAGATATTTGTTCATGCTAATAAGCAGCAGCTAGCAGTAATGGTTGGACCAGGTATATTTGCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTAGTTCGGACGAAACAATTCATATCCTGGAACGTTTAGTTGAGTTTGCTGAGAATGACAAACAGAGAATCCTGGCTTTACATCAATTGGGATGTGTAAGACTCTTAAGGAAAGAATATGATGAGGCACGTCTTCTTTTTGAAGGGGCCGTAAACGCAGGCCATATATATTCTGTGGCAGGTTTAGCTAGGCTGGACGTTATAAAGGGCGACAAGATTTTATCTTATGAGCGGTTGAGCTCGGTCATTTCATCTGTTACTCCACTTGGATGGATGTATCAGGAAAGGTCATTATACTGCGATAGTGACAAAAGGTGGGATGACCTTGAGAAAGCAAGTAATTTGGATCCTACACTTGCATATCCTTACATGTACAGGGCTGCCTCTTTGATGAGTACGCAGAATGCTCAAGCTGCACTAGCAGAAATCAATAGGATTCTTGGGTTCAAACTTTCACTAGAATGCTTAGAAATACGATTTTTTATCCATCTGACTCTTGAGGACTACAAAGCAGCTCTATGTGATGTTCAAACAATTCTTACTTTACGTTCAGATTATAGAATGTTTGAGGGACGTGTTGCTGCATCTCAACTCTGCACACTTGTGCGTGAGCATGTTGAACGTTGGACAACTGCTGATTGTTGGGCTCGGTTATACGACTGTTGGTCTGCAGTTGATGATATTGGGTCCTTGTCTGTTATATACCAGATGCTTGAATCTGATGCGGCAAAAGGTATTCTGTACTTCAGACAGTCATTGCTTCTCCTAAGGTTGAACTGTCCTGAGGCTGCTATGCGGAGTTTACAGTTAGCTCGGCAACATGCATCAAGTGAGCATGAACGACTTGTATATGAGGGGTGGATCTTATATGACACAGGTCATTATGAGGAAGGGCTCCAGAAAGCAGAGGAGTCTATTAGTATCAAAAGATCTTTTGAGGCATTTTTCCTGAAGGCCTATGCATTGGCTGACTCTAGCATAGATCCATCATGTTCACCGATTGTTATCTCACTTCTTGAAGATGCCTTGAAGTGTCCTTCAGATAATCTGCGCAAAGGTCAGGCACTGAACAATCTTGGAAGTGTTTATGTTGACTGCGGTAAATTGGACTTGGCTGCTGATTGTTATATCAATGCCCTTAAAATCCGACACACCCGAGCTCATCACGGTCTTGCGCGTGTTCATTGCCTCAAAAATGACAAGGCTGCAGCTTATATGGAAATGACCGAACTTATCAAGAAGGCAAAAAACAATGCATCGGCTTATGAGAAGAGGTCTGAGTATTGTGATCGTGAACAAGCAAAGGCAGATTTGGAGATGGTCACTAGATTAGATCCTCTTCGGGTGTATCCTTACAGATATCGTGCTGCAGTATTGATGGACAACCACAAGGAAGAGGAAGCCATAGCCGAACTCTCGAGAGCAATTGCATTTAAAGCTGATTTACACCTCTTGCATCTACGTGCAGCATTTCATGAACACAAAGAGGACGTGTTAGGTGCGCTAAGAGATTGTCGTGCTGCGCTCTCAGTGGACCCAAACCACCAAGAAATGTTGGAACTTCATAGTCGAGTCAATAGACACGAGCCGTGA 2661 0.422 MRSFFPAESCKETHPNALNPQSWLQIERGKLPKLSSYPSSASIESLVKVPQPAVLPFYKPADYVEVLAQIHEELESCPPQERSNLFLLQYQVFRGLGEVKLMRRSLQGAWQRANTVHEKIIYGAWLKYEKQEEELIADLLANCGKCAKEFAPVDIASHLPFDVNVSSVGRMTNENRISQNVTFTIGDEEIVCDRQKISELSAPFNAMLKGYFSESRAETIDLSENNISPLGMRAISIFSLTGSLIEVPPNLLLEILAFANKYCCERLKDACDRRLAYLVSSKEDAVELMEYALDENSTVLAASCLQVLLRDLPNCLNDSRVVEIFVHANKQQLAVMVGPGIFALFCFLSEVSMNLNSSSDETIHILERLVEFAENDKQRILALHQLGCVRLLRKEYDEARLLFEGAVNAGHIYSVAGLARLDVIKGDKILSYERLSSVISSVTPLGWMYQERSLYCDSDKRWDDLEKASNLDPTLAYPYMYRAASLMSTQNAQAALAEINRILGFKLSLECLEIRFFIHLTLEDYKAALCDVQTILTLRSDYRMFEGRVAASQLCTLVREHVERWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGILYFRQSLLLLRLNCPEAAMRSLQLARQHASSEHERLVYEGWILYDTGHYEEGLQKAEESISIKRSFEAFFLKAYALADSSIDPSCSPIVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDLAADCYINALKIRHTRAHHGLARVHCLKNDKAAAYMEMTELIKKAKNNASAYEKRSEYCDREQAKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKEDVLGALRDCRAALSVDPNHQEMLELHSRVNRHEP 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02034 886 Gene3D Potassium Channel Kv1.1; Chain A 165 309 IPR011333 -
Viun1g02034 886 Gene3D Tetratricopeptide repeat domain 787 884 IPR011990 GO:0005515
Viun1g02034 886 SMART tpr_5 601 634 IPR019734 GO:0005515
Viun1g02034 886 SMART tpr_5 635 668 IPR019734 GO:0005515
Viun1g02034 886 SMART tpr_5 709 742 IPR019734 GO:0005515
Viun1g02034 886 SMART tpr_5 838 871 IPR019734 GO:0005515
Viun1g02034 886 SMART tpr_5 380 413 IPR019734 GO:0005515
Viun1g02034 886 Gene3D Tetratricopeptide repeat domain 339 561 IPR011990 GO:0005515
Viun1g02034 886 PANTHER ETO1-RELATED 1 885 IPR044631 GO:0010105
Viun1g02034 886 Coils Coil 761 781 - -
Viun1g02034 886 Gene3D Tetratricopeptide repeat domain 596 786 IPR011990 GO:0005515
Viun1g02034 886 SUPERFAMILY TPR-like 460 778 IPR011990 GO:0005515
Viun1g02034 886 SUPERFAMILY TPR-like 692 877 IPR011990 GO:0005515
Viun1g02034 886 ProSiteProfiles TPR repeat profile. 709 742 IPR019734 GO:0005515
Viun1g02034 886 SUPERFAMILY POZ domain 174 275 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02034 Viun-Chr1 31709103 31716611 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02034 - - gmx:100793740 1649.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02034 1 31709103 31716611 Viun7g01515 7 19664099 19668248 PCT