Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01427 ATGGCCACACAAGTGACACTAGTGGCATCAGCATTTCTTCTGGTTCTTTTTCTCCCTTTCTCCACTTCCATCTCTCACTCTCACCGATCCGCTGCCATCAATCTCTTCGCTACCTCTCCCGCAAGCTTAGAAGACGCTTACGAGGCGCTTAGAGTGTTTGAGATTCTTGGATTAGAAGAGAAGAAGACTCACGTGAGCGGGGACGCGTGTCAGAAAGTATTGGAAAATCTAGACTCGGCTTCCCCTCTCAAGGATTTGTTCTATGCCTTGAAAGTTAACAGCATTGTAAAATGCAATGTTAATAGCAACGCTTTAAAGGATATTGCTTCAAGACTTAAAGCTACTGTTCACGATGCGAGTACTCTGCTTGACATATACTACTCGATTGGAGGCTTGGTTCTTATAAAGGATCAGGATTTTAATGTTGATGAGTATCTTCCCGATGTTGACAGGCTTTTTCAATCAATCAAGGCTCTAGGTCAAAGTGATGGAAGATGGCGCTATAGTTCTGATAATCCAGAGTCCAGTACCTATGCTGCTGGATTAGCAATTGAAGCTCTTGCCGGAGTGATCTCACTAGCATCTTCTGAAATTGATCAGTCTAAGGTCAATATAGTGAAAAATGGCATAGTAAAGCTTTTTGATGTCATTGAGAAATATGATGATGGAACCTTTTATTTTGATGAGAAATTTGTTGGAGAAGAGCAACGGAGTTCTCTTTCCGCAACTTCTTCAGTTGTTAGAGGGTTTACTTCATTTGCTGCTGTAACTTCTGGAGAAATAAATCTTCCAGAGGATAAAATATTGGGTCTGGCTAAATTTTTCTTGGGCATTGGAATCCCAGGAGATGCGAAGGACTTCTTCGATCAAGTTGAGTCGTTAGCTTTTCTGGAGACCAACAGGATTTCCATTCCATTGATATTGTCACTCCCTGAAACAGTTTATTCATTGACCAAGAAAGGCCAAGTTAAGGTTAAGGTGAATACAGTGCTTGGTTCAGCTGCACCACCCTTAATAGTTAAGCTTGCCCATGCTTTTAGCACTGGTGCAAAAGATTCAGCTATTATTGACAGCAAGGAGCTCCAGTATGACCAAGAAAGTGGATTTCATGTCTTGGATGCTTTCCCTAAGAACATGGATGTGGGAACATATGTGTTTGTTTTTGAGATTATGCTTCATGATTCTGGCAGTGACAAAGTTTATGCAACTGGAGGACAAATTCCTGTACCAATTTATGTCACTGGGTTCATTAAAGCCAATAATGCAGAAATCACTGTTGCGGATAGTGATCTTGGACGTGCCCAAACCCAGAAAAAGCTAGATGTGGCTGGAAATGATGTAGTTTCACTCTCAGCTAACCACTTGCAGAAGTTGAAGTTTTCTTTCCAATTGACAACACCTCATGGTCATGTTTTTAAGCCTCAACAGGCATTTTTCAAGTTGAGACATGAGACAAAGGTTGAGCACATCTTCGTGGTTGGAAACACCGGCAAGAAGTTTGAGATAATTCTTGATTTTCTTGGCTTGGTGGAGAAACTTTTTTATCTCTCAGGCAGATATGACATTGAGTTAACTGTTGGTGATGCTGTCATGGAGAATTCTTTCTTACGGCTACTGGGCCATCTCGATTTAGATCTTCCAAAAGCACCTCAGAAGGCAGCCCGTCCTCCACCCCCACCTGTTGACCCTTACTCAAGATATGGGCCGAAAGAAGAGATTACACATTTATTTAGGGCTCCTGAAAAGAAACCACCCCAAAATCTCTCTCTCATATTCTTGGGTTTAATCCTTTTGCCATCCATTGTCTTTTTGGTTGGGTTACTGCGATTGGGAGCGAACCTAAAGAATTTCCCTAGTTCAACAGTCCCTGCTACATTTGGGATCCTTTTCCATGTTGGCATTGCTGGGGTTTTGTTACTTTATGTATTGTTCTGGTTGAAGCTGGACCTGTTCACTACACTCAAGGCATTTGGTCTTTTGGGAGCTTTCCTGATGTTTGTGGGGCACAGAATTCTTTCTCATGTCGCTTTCACATCAACCAAGTTGAAAGCTGCATGA 2058 0.4198 MATQVTLVASAFLLVLFLPFSTSISHSHRSAAINLFATSPASLEDAYEALRVFEILGLEEKKTHVSGDACQKVLENLDSASPLKDLFYALKVNSIVKCNVNSNALKDIASRLKATVHDASTLLDIYYSIGGLVLIKDQDFNVDEYLPDVDRLFQSIKALGQSDGRWRYSSDNPESSTYAAGLAIEALAGVISLASSEIDQSKVNIVKNGIVKLFDVIEKYDDGTFYFDEKFVGEEQRSSLSATSSVVRGFTSFAAVTSGEINLPEDKILGLAKFFLGIGIPGDAKDFFDQVESLAFLETNRISIPLILSLPETVYSLTKKGQVKVKVNTVLGSAAPPLIVKLAHAFSTGAKDSAIIDSKELQYDQESGFHVLDAFPKNMDVGTYVFVFEIMLHDSGSDKVYATGGQIPVPIYVTGFIKANNAEITVADSDLGRAQTQKKLDVAGNDVVSLSANHLQKLKFSFQLTTPHGHVFKPQQAFFKLRHETKVEHIFVVGNTGKKFEIILDFLGLVEKLFYLSGRYDIELTVGDAVMENSFLRLLGHLDLDLPKAPQKAARPPPPPVDPYSRYGPKEEITHLFRAPEKKPPQNLSLIFLGLILLPSIVFLVGLLRLGANLKNFPSSTVPATFGILFHVGIAGVLLLYVLFWLKLDLFTTLKAFGLLGAFLMFVGHRILSHVAFTSTKLKAA 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01427 685 Pfam Oligosaccharyltransferase subunit Ribophorin II 18 676 IPR008814 GO:0006487|GO:0008250|GO:0016020
Viun7g01427 685 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 104 188 IPR008930 -
Viun7g01427 685 PANTHER RIBOPHORIN II 5 684 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01427 Viun-Chr7 18258506 18266377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01427 K12667 - gmx:100814831 1086.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01427 7 18258506 18266377 Viun7g01427 7 18258506 18266377 ECH
Viun1g02127 1 32529587 32538191 Viun7g01427 7 18258506 18266377 PCT