Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02127 ATGGCCAGATACCTAGGAGGATTACTGGCGCTGCTTTTTGCTGCTTCGATCTGCGGAGCCGTCACGATTCCTGGCCCCGTCTCTGATGCTCACCGTTCCGCAGCATCGGAGCTCTTCGGTGACTCATTTTCAAGTTTAGAAGATGCGTATGAGGCCCTCAGAGTTTTTGAGATTCTTGGGGTTGGGAATAAGCCTGATGTGAGCGCAACCACGTGCAAGCAAGTAGTGGAAAATCTAGGGTCCTCATCCCCTGTGAAGGATTTGTTCTATGCATTAAAGGTTAATGGCATATTAAAATGCAAGGTTAATGCGGACGTTTTCAAGGATATTGCTGTGAGGCTTAAAGCCACTGTCAATGATGCAAGCACTTTGGTTGACATGTACTATTCAATAGGAAGTTTGGTTCTTATAAAGGACCAGGCTTCTGATGTTGATGTGCTTCTTGCTGATGCAGATGGAACCTTCCATTCAATCAAGGCTCTGAGCCAAAGTGATGGAAGATGGCGCTATAGTTCTGATAATCCAGAATCTAGTACCTTTGCTGCTGGGTTAGCACTTGAAGCATTGGCTGGAGTGATCTCATTAGCATCTTCTGAAATTGATCTTTCTAGGGTGAATACAGTGAAAAATGATATATTGAAGCTTTTTGACAGCATCGAGAAATATGATGATGGAACCTTCTATTTTGATGAGAAATTTGTTGGTGGACGTGAGCATCAGGGTTCTCTTTACACAACTTCATCTGTTGTTCGAGGGCTCACAACATTTGCTTCTGCAATTTCTGGAAAAATAAATCTTCCAGGGGATAAAATTTTGGGTTTAGCAAAATTTTTCCTGGGTATTGGAATCCCAGGTGATGCCAAGGACTTCTTCAATCAAGTTGAATCATTATCTCTTCTGGAGAACAACAGGATTTCCATCCCATTGGTACTGTCACTTCCTGAAACAGTTTATTCATTATCCAAAAAAGATCAGCTCAAGGTTAGGGTGAATACAGTACTTGGTTCAGCTGCACCACCGTTAACAGTTAAGCTAGTCCGAGCTTTCCGCCCTGATGCTAAAGATTCAGCTGTTTTTGAGAACAAGGAGCTCCAATATGATAAAAGTAATGGAATTCATGTCTTGGAAGTTTTCCCAGGCAATGTGGATGTGGGAACTTATGTGTTTGTTTTTGAGATTGTACTTCACGACTCTGCTGGTGAAAAAGTTTTTGCTACTGGAGGTCAAATTCATGTACCAATATATGTCACTGGCATTATTGAAGTCAGCAATGCAGAAATTGCAGGTCTTGACAGTGATCTTGGAAGTGTTGAAACCCAGAAAAAGCTAGATTTGGCTGGAAATGTTGTTGTTGAACTCTCAGCTAACCACTTGCAAAAGTTGCACTTTTCTTTCCAATTGACAACACCGCATGGTCATGCTTTTAAGCCTCATCAGGCATTTTTCAAGTTGAAGCATGAGACAAACCATGAACACATCTTTGTGATTGGAAATACTGGCAAGAAGTTTGAGATTGTTCTGGATTTTCTTGGTTTGGTGGAGAAGTTTTATTATCTGTCGGGCAGATATGACATTGAGCTGACCGTCGGAGATGCTGTCATGGAGAACTCTTTCTTGCGGCCACTGGGTCATGTTGATTTAGAACTTCCAGAAGCTCCTGAGAAGGCATCGCGTCTTCCTCCACTCCCTGTTGATCCTTACTCAAGATATGGTCCCAAAGCTGAGATAGCCCACATATTCAGGGCTCCTGAAAAACGACCACCCCAGAACCTCTCTCTTACTTTCTTGAGTTTAACTCTTCTTCCATTTATTGGCTTTTTAGTTGGGCTGTTACGCTTGGGGGTGAACTTTAAAAATTTTCCATCTTCAGCAGCACCTGCTACATATGCTATCCTATTCCATCTCGGCATCGCTGCAGTTCTATTCCTCTACGTACTTTTCTGGTTGAAGCTGGACTTGTTTACTACACTTAAAACTGTAGGACTTTTGGGTGCTTTTCTCATGTTCGTGGGGCACAGAATTCTCTCCCATCTCGCTTCAACTTCATCCAAGTTGAAGTCTGCATGA 2067 0.4257 MARYLGGLLALLFAASICGAVTIPGPVSDAHRSAASELFGDSFSSLEDAYEALRVFEILGVGNKPDVSATTCKQVVENLGSSSPVKDLFYALKVNGILKCKVNADVFKDIAVRLKATVNDASTLVDMYYSIGSLVLIKDQASDVDVLLADADGTFHSIKALSQSDGRWRYSSDNPESSTFAAGLALEALAGVISLASSEIDLSRVNTVKNDILKLFDSIEKYDDGTFYFDEKFVGGREHQGSLYTTSSVVRGLTTFASAISGKINLPGDKILGLAKFFLGIGIPGDAKDFFNQVESLSLLENNRISIPLVLSLPETVYSLSKKDQLKVRVNTVLGSAAPPLTVKLVRAFRPDAKDSAVFENKELQYDKSNGIHVLEVFPGNVDVGTYVFVFEIVLHDSAGEKVFATGGQIHVPIYVTGIIEVSNAEIAGLDSDLGSVETQKKLDLAGNVVVELSANHLQKLHFSFQLTTPHGHAFKPHQAFFKLKHETNHEHIFVIGNTGKKFEIVLDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLRPLGHVDLELPEAPEKASRLPPLPVDPYSRYGPKAEIAHIFRAPEKRPPQNLSLTFLSLTLLPFIGFLVGLLRLGVNFKNFPSSAAPATYAILFHLGIAAVLFLYVLFWLKLDLFTTLKTVGLLGAFLMFVGHRILSHLASTSSKLKSA 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02127 688 Pfam Oligosaccharyltransferase subunit Ribophorin II 8 680 IPR008814 GO:0006487|GO:0008250|GO:0016020
Viun1g02127 688 PANTHER RIBOPHORIN II 9 687 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02127 Viun-Chr1 32529587 32538191 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02127 K12667 - gmx:100780415 1184.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02127 1 32529587 32538191 Viun1g02127 1 32529587 32538191 ECH
Viun1g02127 1 32529587 32538191 Viun7g01427 7 18258506 18266377 PCT