Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01385 ATGTTGAACTGGCTAAGAAATATAAGTGCTTCTAATGTATTCAATTGGAAGCGTCAAGGTGTTCAGGATGTTTCACCAGATATTGAAATGACGGATTATAGAAGAATTCCAAATACATATAGTGAGAACCCTTCAGGCCTAGTTAATGATGAGAGCATTAATGTTCAACCCATTGCCGATTTGGATTTCTTCTTTGAAAGAATTTACAGCTATTACTGTGAGAAAGGGCTTTGGTGTATCATCCTAAGGTGGATTGCTGAACTTCTGAGTTTAGGGTTCATCATATGCTTTTCAGGATTTATCTTTCTATATGTTGACTGGAATGGACTCCGTAATGCCAAGTGTGGGATGGCTGCAGTTGAATCTGGAAGAGAACCTTGTGATCTTGCTAAAGAAGCAATTCATCAACACCCTTTAATCCCATTAACAGTACACAGAGCTATTATTGTTGGATACCTGGGAGTATTTTTTGTCTATTGGATATTTTGCTTATTGAAATTCTTCCTTCAATTGAAGGATACACTGAAAATCCATCTGTTTTACTACAACAGTCTCTGTGTAACAGATCATGAAATTCAAACCATGTCCTGGCCTACCATTCTTGAAAAGATTGTTCATTTGCAAAAGTCACAACAACTCTGTGTGGTAAAGAATCTTTCTGCTCATGACATTGTGATGAGGTTGATGCGAAAGGAGAACTATTTGATTGCGATGATCAACAAGGGTGTGCTTACTTTCCCCATTTCTAAATGGGTTCCAGGTGCTGGATCAACAGTCAAATATGGTACTGATGGAACTCAATATCGTCTAATACTACCCAGAACGCTTGAGTTGGCTTTAGATTGGTGCATCCTGCAAAGCATGTTTGACAGAAACTTTTGTGTCAGAATGAGTTTTGTGTCAGATTCAAAGACACTAAAAAGAAGACTTATGGTAGTTGGTATTGCAATGTTGGTACTTTCTCCATTTCTTATCATGTTCATGCTGTCACATCTCTTTCTGAGGTATGCTGAGCAAATTTATAATCAACCAAGCACAATATCATCCCGAAGATGGTCAAATTTGTCACGATGGGTCTTTAGGGAATTCAATGAGGTTGATCATCTGTTCAAGCATCGGACTAATAGTGGTGTATCTCATGCTTCTATCTATATGAAGCAATTCCCTTCACCAATGATATCTATCATTGAAAAATTCATCTCATTTGTATCGGGTGGCTTTGTTGCGATTCTGATCATCCTTGCTTTTTTAGAAGAGTCTCTGCTGGAGGGTCATATATTGGGTCGGAACTTGTTATGGTATGCTGCTATTTTTGGAGCTATAACTGCTCTTAAACGGGTTGCATTTACAGAGAACGAGGTTTTAGTCACTGATCCCGAAGGAGCAATGTCAATGGTAGTTGACCATACACATTATATGCCCAAAAGATGGCGGGGTAAAGAAAGTACTGAAATGGTCCGTCATGAGTTTAAAACCTTGTTCCAGTATAGTGGGATGATGTTACTTGAGGAGATGGCTTCAATTTTCGTTACTCCATTCTTGCTTTTGTTTGTGGTCCCAGAGCGGGCTGATGATATCCTGCAGTTTATTGAAAACTTTACTGTATACGTTGAAGGTGTTGGTGATGTTTGCAGCTTCAGTGTCTTCAATTTTCAAGAGTATGGAAATAAGAGTTATGGCTCTCCATCTAATGTGCCTCGTAGCCAGAGAAGTTCCCAGGGAAAGTTGGAGAAATCATTTTTGAGCTTCCATAATAGTTACCCTTTTTGGGAACCAAATAATGAAGGAAAACAGTTTCTGCAAAATCTGAGAAGATTCAGAGACAAAAAATTAGCAGAGCATGTAAAGAGACATGGATTTGTCCCCATCAGACCATGGAGAGATGACAACAACATGGGAAGGAATGGAGACAAAAACAGTTTTACATCCAAGGAAATGTCACATGGTACTTTTGTGACCGGCAATCACTTGGGTTCATTGTTGGTAACTGAATCCAGCAATCGAAACAATCATCCCTATCTTCTAGATTGGTACTACATTTCCCAACCTCGTTATGCAACTCCTGGACACGTTTCAACAAATCGTTTCGAAGCAACTAAGCATCATTCCCATTCAATCTTGGAAGAAAATGAACATGAGTATTACCAACACATGAACGAGTTTTGCAATGAACGTGGTGCTTCCTATCTAGGTGCTTCCACATCATCTTTCATCTTCCGGGAAAGCCTAATTGAGGATTCACATTCCATTGATGTGTCTCGCACTACCAAGAGTCGTTGGTGGGATAGAAGTCAACCTCGGAATGAAGATAGTCACAAAAGCTTTCTGGAACCACCAGATTTCAATGACCAAAGAACACATAATTACCACGATAGATTCTCCGACAGAGGGTCAGAAGATCAAGGTCAGGAACACTTGTGTCAGGGTCAACATGATCACACAAGTTTTTCGGAGCCACAAGATTTCTATCACCAAACAACTTACAATTTTCACGATAAATTTTCTGATGAGGGGCAATACTTGTACGGGGGAGATTATCACGAGCTACCTAGTATGGCAGAAGCAGATAATTTAGATGCAGGAAAATTGAATCTTCGTTTTGGTGAGTCCACCCCAAAAAGTCCCACTGTTCTAATGGCAAAGAAGTTGGATATGATTAAAGATATTGATGGCAGGAGGGAGACCCTAAAACTTGGTGTGAGAGTGCTTGATTTGTGGTATATTCATAACCGTGAATCCAATGTGCACCTTGAAATGATTTTGATTGACCAAATGGGGGACAAGATACATTGCATAGTTAAGAAGGACGAATTTGATATCTGGGATGGTAAGTTGAAGGAAGGCGATACATATCTCATGCACAATTTCAAAATTGTGAAAAATGATGGTCAATATAGAGTGTGTGACCATCCTTTTAAATTGTTGTTTATCGGAGCCACCTCTGTCCGTCCCCAAGCTATTGCAAATGTACCCAATAGTTTTTACCAATTTCGAAGCATAAAAGTGGTAGTGGCTGTTAATTTCTCTCCGGATTTGTTGATTGATTTGATTGGTTGGGTAGATAACGTCAAAACTAAGGCACAATCTAAAAATGTTATTTTTAGTTTGATGGATATGAGTGGTGGTGTGGTTTCTTGTACGTTATGGGATGAATATTGCAAGAAAGTTTTAGAAAGGTATAATGACAATCCAAATACCGACAAGTTGGTTATGATTCTTACTCAAGCCAAGGGGAATGGCCAGTCTGTGTCCAATACATGGAATGGGACCAAATTACTTATGGATGATGATATTCCCGAAATTATAATCTCTGCTGATGAATTAACAATTATGAGTCAATCTGGTACTCAGTCCTCCCAATACAGTGATGCTGAAAGGTATAAACTTCAGTTGCAAGTTTGTGATGATGCGTTTAATTGTGCTAACTTTGTGGTGTGGGATCAAGAATGTAGAAACATTATTGGTATTTCCGCTGAAGAATTGCAAAAGAAAATGATCAAGGTGGGTGAAGATGATCCCAAGTGCTTTCCTGATGACTTGGATGTAATGTTAGGTTGTACTCTCGCTTTCAAAGTTCGAACCCAACCAAGGAATAGATGTGTCTTTGTCATTAAAGTGTCTGACTTACTTGAAATAATCAATTACATTAAGAAGCTTATACAACCCGTACAAATTGCTGACTTTCGTTCAAAAGGGGTTTGTAATTTAGCAGCAGACACTGATCATGACTTGATGAGTTTGAGTGGAACAACTGACAATGATCCTGATATTTCTTCTTTGGGTACTCCATCAAAGAGAATCCTTCCAAATAGTGGTGTATCTGTATAA 3828 0.3887 MLNWLRNISASNVFNWKRQGVQDVSPDIEMTDYRRIPNTYSENPSGLVNDESINVQPIADLDFFFERIYSYYCEKGLWCIILRWIAELLSLGFIICFSGFIFLYVDWNGLRNAKCGMAAVESGREPCDLAKEAIHQHPLIPLTVHRAIIVGYLGVFFVYWIFCLLKFFLQLKDTLKIHLFYYNSLCVTDHEIQTMSWPTILEKIVHLQKSQQLCVVKNLSAHDIVMRLMRKENYLIAMINKGVLTFPISKWVPGAGSTVKYGTDGTQYRLILPRTLELALDWCILQSMFDRNFCVRMSFVSDSKTLKRRLMVVGIAMLVLSPFLIMFMLSHLFLRYAEQIYNQPSTISSRRWSNLSRWVFREFNEVDHLFKHRTNSGVSHASIYMKQFPSPMISIIEKFISFVSGGFVAILIILAFLEESLLEGHILGRNLLWYAAIFGAITALKRVAFTENEVLVTDPEGAMSMVVDHTHYMPKRWRGKESTEMVRHEFKTLFQYSGMMLLEEMASIFVTPFLLLFVVPERADDILQFIENFTVYVEGVGDVCSFSVFNFQEYGNKSYGSPSNVPRSQRSSQGKLEKSFLSFHNSYPFWEPNNEGKQFLQNLRRFRDKKLAEHVKRHGFVPIRPWRDDNNMGRNGDKNSFTSKEMSHGTFVTGNHLGSLLVTESSNRNNHPYLLDWYYISQPRYATPGHVSTNRFEATKHHSHSILEENEHEYYQHMNEFCNERGASYLGASTSSFIFRESLIEDSHSIDVSRTTKSRWWDRSQPRNEDSHKSFLEPPDFNDQRTHNYHDRFSDRGSEDQGQEHLCQGQHDHTSFSEPQDFYHQTTYNFHDKFSDEGQYLYGGDYHELPSMAEADNLDAGKLNLRFGESTPKSPTVLMAKKLDMIKDIDGRRETLKLGVRVLDLWYIHNRESNVHLEMILIDQMGDKIHCIVKKDEFDIWDGKLKEGDTYLMHNFKIVKNDGQYRVCDHPFKLLFIGATSVRPQAIANVPNSFYQFRSIKVVVAVNFSPDLLIDLIGWVDNVKTKAQSKNVIFSLMDMSGGVVSCTLWDEYCKKVLERYNDNPNTDKLVMILTQAKGNGQSVSNTWNGTKLLMDDDIPEIIISADELTIMSQSGTQSSQYSDAERYKLQLQVCDDAFNCANFVVWDQECRNIIGISAEELQKKMIKVGEDDPKCFPDDLDVMLGCTLAFKVRTQPRNRCVFVIKVSDLLEIINYIKKLIQPVQIADFRSKGVCNLAADTDHDLMSLSGTTDNDPDISSLGTPSKRILPNSGVSV 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01385 1275 Gene3D - 988 1105 IPR012340 -
Viun7g01385 1275 MobiDBLite consensus disorder prediction 760 816 - -
Viun7g01385 1275 CDD RPA1_DBD_A_like 897 982 - -
Viun7g01385 1275 Gene3D - 881 984 IPR012340 -
Viun7g01385 1275 Pfam Domain of unknown function DUF223 918 1004 IPR003871 -
Viun7g01385 1275 MobiDBLite consensus disorder prediction 760 807 - -
Viun7g01385 1275 SUPERFAMILY Nucleic acid-binding proteins 886 983 IPR012340 -
Viun7g01385 1275 SUPERFAMILY Nucleic acid-binding proteins 1003 1103 IPR012340 -
Viun7g01385 1275 Gene3D - 1106 1224 IPR012340 -
Viun7g01385 1275 Pfam Autophagy protein ATG9 55 550 IPR007241 GO:0006914
Viun7g01385 1275 PANTHER APG9 AUTOPHAGY 9 16 796 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01385 Viun-Chr7 17254249 17263097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01385 K17907 - gmx:100779344 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01385 7 17254249 17263097 Viun7g01385 7 17254249 17263097 ECH
Viun1g02095 1 32293678 32301100 Viun7g01385 7 17254249 17263097 PCT