Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02095 ATGTTTAGCAGGCCAAGGGGTGCCAGTGCATTTAGTATATTCAAATGGAAACAACCAGGTGCATCATCTCTGACAGCAGGTTTACTTCACGAAGATCAGCCAGAGATTGAATTGTCTGATTATGGAAAGGTTCCTAGTCCGGGCAGCGAGAGCCCTTCAGGGCTTCTTAATGGTGACAGCCTAAATGTAGAACCAATCTCCGATTTGGATCTCTTCTTTGAAAGGCTTTACAGCTATTACTGTGAGAAAGGGCTTTGGTGCATCATTATAAAATGGATTGTTGAGCTTCTAAGTCTAGGGTTCACCATATGTTTTTCAGGATTTTTATTACATGTTGATTGGAATGGACTCCGTAATGCAAAGTGTGGGATGGATGCAGTTGAATCTGGAATTAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATCAACACCCCTTAACCCCACTAACAATTACCAAAGCTATTATTGTTGGATACTTAGGATTATTCTCTATCTATTGGATTTTTTGCTTCTTGAGATTCTTTGCACAACTAAAGGATACTCTTGAAATCCGGCATTTTTACCACAATAGTCTCCATGTCACTGACAATGAAATTCAAACCATGCCATGGGCTACAATTCTTGAAAAAGTTGTTCTGCTACAAAGGTCTCAGCAACTTTGTGTGGTAAAAGATCTTTCTGCCCATGACATTGTCATGCGGTTGATGCGGAAGGAAAACTACTTAATTGGAATGCTCAACAAGGGTGTGCTAGCTTTCCCTATTTCACCGTGGTTTCCAGGTGCTGGTCCTACAATGACATCTGGTTCTAGTGGAACACAGAATCGTGTAATACTAACCAAGACCCTTGAGTGGACTTTGAATTGGTGCATCCTGCAGAGCATGTTTGATCGAAACTTTTGTGTCAGAAGGGATTTTGTGTCAAATCCGAAGACATTACAAAGAAGGCTCATGGTTGTTGGGTTTGCAATGCTTTTACTCTCTCCATTTCTTGTCATATTCATGCTGGTGTATCTCTTTCTGAGACATGCTGAGCAATTTTATAATCACCCTAGCACCGCATCATCTCGAAGATGGTCAAATCTGTCTAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAGGCACCGGATTAATAGTAGTGTATTACACGCATCTGATTATCTCAAGCAATTTCCTGCACCAATCATATCTATCATTGCAAAATTCATCTCTTTTGTATCGGGTGGCTTTGCTGCAGTTCTGATCATCATTGCTTTTCTTGAGGAGTCTCTTCTAGAGGGCCATATATTTGGTCGGAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCCATTAGCCGGGCTGCAATCACGAGTGAGCTTCTGGTTTTAGATGCTGAAGGAGCTATGTCTATGGTTGTCCAACATACTCATTATCTGCCAAAGAGATGGCGTGGCAAAGAAAGTACTGAATCAGTCCGTGTTGAGTTTGCAACCTTATTTCAGTATACTGGAATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTCACTCCATACTTGCTTCTGTTTATTGTCCCAAAGCGGGTTGATGACATCTTGCTTTTCATTGCTGATTTCACTGTAAATGTTGAAGGTGTTGGTCATGTTTGCAGTTTTAGCACCTTTGATTTTCAAGAACATGGAAACAGTCATTATGGTTCCCCTTGCAATGCACCTCGTAGCCGGAGGAGTTCTCAAGGGAAGATGGAGAAATCATTGCTGAGCTTTCAGAGTAGTTATCCATCATGGGAACCAAGCGCACAGGGTAAACAGTTTTTGCTAAATCTTAAAAAATTCAGAGAGGAAAAGTTACCAGTGCACGGAAACATACATGCAGCTTCCCCTCCTAGAATGTGGAGGGGTATTTCCAACACAGGAAGCAATATTGGAGACAGAAACAGGTTTATGTCCAGGGAAATGCCATACAGTACTTTTTTAACTGCCAATCACTTGGGTTCTCTGTGGGTGATGGAAGCCAACCAACACAGTCATCCCTATCTCCTTGATTGGTACTATACATCTCGATCTTCTGACGTAAATCAAAGAGAAGATCCTTCAGAAGCGTTTGGAATAATAGAGCATGATTCTAGAGAGCATTGGATTCCCTCCAATATGACACAAAATGAAAGTGGATATGAGGAATACTCAAATGAGAATCGTCGAGGTTGGGCTCAATCTCATCTTGTGACTTCCACATCCGTTCCCATTTTCAGGGAAAGCTCAATTCAGGATCAGAGTTATAATGAACTGACCCCTAGTAGCAGGAGCCATTGGTGGGCAAGAAGTCACGCGCAGCAGGGTGGACAGAATCAGACAAGCTTTTTTGAGCCTCCAGATTTCAATGAGGAAAGATATAATTATTATGATAAGTTTTCTGATAGAGGGTCAGAGGAAGAAGATCGTGAACAACGCTTGTACTCTAGAGATAGTCACAGATTATCTAGAACATACACAGATGACTTGGGGGCTGGGGAAATAAATCTTCATTTTGATGATATTTATAGCAGACCTCCAGAAACCCCACCTGCAAGCTTTTGA 2577 0.4168 MFSRPRGASAFSIFKWKQPGASSLTAGLLHEDQPEIELSDYGKVPSPGSESPSGLLNGDSLNVEPISDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFXLHVDWNGLRNAKCGMDAVESGIKPCDLAKEALHQHPLTPLTITKAIIVGYLGLFSIYWIFCFLRFFAQLKDTLEIRHFYHNSLHVTDNEIQTMPWATILEKVVLLQRSQQLCVVKDLSAHDIVMRLMRKENYLIGMLNKGVLAFPISPWFPGAGPTMTSGSSGTQNRVILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLQRRLMVVGFAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFRHRINSSVLHASDYLKQFPAPIISIIAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAITSELLVLDAEGAMSMVVQHTHYLPKRWRGKESTESVRVEFATLFQYTGMMLLEEMASIFLTPYLLLFIVPKRVDDILLFIADFTVNVEGVGHVCSFSTFDFQEHGNSHYGSPCNAPRSRRSSQGKMEKSLLSFQSSYPSWEPSAQGKQFLLNLKKFREEKLPVHGNIHAASPPRMWRGISNTGSNIGDRNRFMSREMPYSTFLTANHLGSLWVMEANQHSHPYLLDWYYTSRSSDVNQREDPSEAFGIIEHDSREHWIPSNMTQNESGYEEYSNENRRGWAQSHLVTSTSVPIFRESSIQDQSYNELTPSSRSHWWARSHAQQGGQNQTSFFEPPDFNEERYNYYDKFSDRGSEEEDREQRLYSRDSHRLSRTYTDDLGAGEINLHFDDIYSRPPETPPASF 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02095 859 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Viun1g02095 859 MobiDBLite consensus disorder prediction 775 791 - -
Viun1g02095 859 MobiDBLite consensus disorder prediction 775 794 - -
Viun1g02095 859 MobiDBLite consensus disorder prediction 38 57 - -
Viun1g02095 859 PANTHER APG9 AUTOPHAGY 9 2 812 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02095 Viun-Chr1 32293678 32301100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02095 K17907 - gmx:100777405 1511.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02095 1 32293678 32301100 Viun1g02095 1 32293678 32301100 ECH
Viun1g02095 1 32293678 32301100 Viun7g01385 7 17254249 17263097 PCT