Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01299 ATGTCCGGCGGCAAGGTGAAGGGCATTCTTAAAGGCTTTAGATACTTTACTCAAATATTTGAGAGTGAAAAAGAACAAGAAATTCAGATCGGACTTCCCACAGATGTAAAGCACGTGGCTCATATAGGGTGGGATGGACCCTCTGTAAATTCTCCCAGCTGGATGACCGAGTTTAAAACTTCTCCAAGTGTAGATGTTCAGAATAAAGGTCAAGAAAATGGAGTGAAACGAGTTGCAGAAGAATCAAGGAGAAGAAATCATCGAGAGTCATCATCGGATTTACCCAAGGCATCTAAAAGACAGTCAACGGGTGTTACAGATTCTCCGACAAAGGAAAAGACAAGCAAACCGCGAACGAGGAAATCTTCCAACAAGAACAAAGATGAGATCGCCCAGTCACCCCGAATACCCGAATACCCGGATCCATTTCAACTACCTCCTCCGCCTTCACCCTCACCCGATAATAATAATAATAATAATATTCCTAAAAAGTCTCGTCGCCATAAGACAAAGGAGCATTCTAGTGGCGTCCCTTCCAAATCCAGAACCAAAGCCCATTCTGCTTCGGATTCTGGATCCCCGGCCCAATCCAAGTCCAGGAACACCCACACCACCTTTGATGAAACTGAACACGATCTTTTGCTCTAA 648 0.4444 MSGGKVKGILKGFRYFTQIFESEKEQEIQIGLPTDVKHVAHIGWDGPSVNSPSWMTEFKTSPSVDVQNKGQENGVKRVAEESRRRNHRESSSDLPKASKRQSTGVTDSPTKEKTSKPRTRKSSNKNKDEIAQSPRIPEYPDPFQLPPPPSPSPDNNNNNNIPKKSRRHKTKEHSSGVPSKSRTKAHSASDSGSPAQSKSRNTHTTFDETEHDLLL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01299 215 MobiDBLite consensus disorder prediction 49 70 - -
Viun7g01299 215 MobiDBLite consensus disorder prediction 44 215 - -
Viun7g01299 215 MobiDBLite consensus disorder prediction 74 95 - -
Viun7g01299 215 FunFam Elongation factor Ts, mitochondrial 23 68 - -
Viun7g01299 215 CDD CRIB 28 61 - -
Viun7g01299 215 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Viun7g01299 215 Pfam P21-Rho-binding domain 29 67 IPR000095 -
Viun7g01299 215 Gene3D CRIB domain 23 71 IPR036936 -
Viun7g01299 215 MobiDBLite consensus disorder prediction 111 134 - -
Viun7g01299 215 MobiDBLite consensus disorder prediction 180 202 - -
Viun7g01299 215 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 5 198 IPR044510 -
Viun7g01299 215 MobiDBLite consensus disorder prediction 139 155 - -
Viun7g01299 215 MobiDBLite consensus disorder prediction 96 110 - -
Viun7g01299 215 SMART PBD_5 30 61 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01299 Viun-Chr7 15003332 15004792 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01299 - - vun:114192631 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01299 7 15003332 15004792 Viun7g01299 7 15003332 15004792 ECH
Viun1g02132 1 32571097 32573930 Viun7g01299 7 15003332 15004792 PCT