Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02132 ATGTCCAACAACAACAAGGTGAAGGGTCTCCTCAAAGGTCTAAGATTCATTTCTCAGATGTTCGATGAGAAAGATGCAGACATTCAGATTGGTCATCCCACAGATGTAAAGCATCTAGCACATATTGGATGGGATGGTCAAGGCCCCTCTGACAATAACCCCTCCTGGATGAACGAGTTTAAATCTGTCCCAGGGAATTCATCTCACAGTAGTAAAGGAGAGATGCATAGCAAAGAATCCAATAGTTCAATCCAAAGGTCCTCTGAAGATTCGATGGAAAGAAGTTCAAGATCTGTGAAAGGTCGGTGTGATGAGAGGCAGTCGTTGGAGTCGGGAAAATGTAAACATTCAAATTCAACGGTTGGGAATGTAAGAGAGTCTCATGCAAAGGAAAAATTCGACAGACCAAGGCGTACAAAAAAGACATCAAAACCATCGCAACAACCAAATGATTCATGTCAAGCATCGAAAGACACCGAGCACGAGATGCAGACGGGTGATAATTCCCACCAACAAGAAGACACTGATTTGGCGCCTAAAAAGTCACGTCCCAGGATGACAAAAGATGGTTCCACTGTTGGTGGTGCCTCTGCCAAAGCAAGATCAAGATCCGAAGGCCATGGTAGACGTACCTCCAAATTAGCTAGCAAACATGAGTGTTTAGAAGAAGATGGACACGAAGTTGAGACAAAGTCTAAAGAAGATACGACCAAAAGTATCCTAACTGAACAATGA 735 0.434 MSNNNKVKGLLKGLRFISQMFDEKDADIQIGHPTDVKHLAHIGWDGQGPSDNNPSWMNEFKSVPGNSSHSSKGEMHSKESNSSIQRSSEDSMERSSRSVKGRCDERQSLESGKCKHSNSTVGNVRESHAKEKFDRPRRTKKTSKPSQQPNDSCQASKDTEHEMQTGDNSHQQEDTDLAPKKSRPRMTKDGSTVGGASAKARSRSEGHGRRTSKLASKHECLEEDGHEVETKSKEDTTKSILTEQ 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02132 244 Gene3D CRIB domain 25 79 IPR036936 -
Viun1g02132 244 Pfam P21-Rho-binding domain 29 63 IPR000095 -
Viun1g02132 244 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 5 212 IPR044510 -
Viun1g02132 244 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Viun1g02132 244 MobiDBLite consensus disorder prediction 90 112 - -
Viun1g02132 244 MobiDBLite consensus disorder prediction 202 244 - -
Viun1g02132 244 CDD CRIB 28 62 - -
Viun1g02132 244 SMART PBD_5 30 63 IPR000095 -
Viun1g02132 244 MobiDBLite consensus disorder prediction 41 244 - -
Viun1g02132 244 MobiDBLite consensus disorder prediction 155 187 - -
Viun1g02132 244 MobiDBLite consensus disorder prediction 48 89 - -
Viun1g02132 244 MobiDBLite consensus disorder prediction 125 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02132 Viun-Chr1 32571097 32573930 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02132 - - gmx:102666244 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02132 1 32571097 32573930 Viun7g01299 7 15003332 15004792 PCT