Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01225 ATGGCTTCCGATTCCAATTCAAATCTTAGAATCACCATTGAAAGCAATCCTCCAGAGTCACGTCTAGCTGAATTGAATATCAAGTGTTGGCCCAAATGGGGCTGCTCTCCAGGGAAGTACCAATTAAAGTTTGATGCTGAAGAGACATGCTATTTGTTGAAAGGGAAGGTGAAGGCATACCCAAAAGGGTCATCAGAGTTTGTAGAGTTTGGTGTTGGAGACCTTGTGACCATCCCAAAAGGACTCCATTGCACTTGGGATGTTTCAGTTGCTGTGGATAAGCACTACAAATTTGAATCATCTTCTTCTTCTTAG 315 0.4254 MASDSNSNLRITIESNPPESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGVGDLVTIPKGLHCTWDVSVAVDKHYKFESSSSS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01225 104 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Viun7g01225 104 SUPERFAMILY RmlC-like cupins 25 96 IPR011051 -
Viun7g01225 104 PANTHER OS04G0445200 PROTEIN 5 99 - -
Viun7g01225 104 CDD cupin_TM1112-like 30 98 - -
Viun7g01225 104 Gene3D Jelly Rolls 2 98 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01225 Viun-Chr7 13876052 13876929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01225 - - gmx:100500522 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01225 7 13876052 13876929 Viun7g01225 7 13876052 13876929 ECH
Viun1g02193 1 33029470 33030246 Viun7g01225 7 13876052 13876929 PCT