Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02193 ATGGCTGCAGATTCAAACTCAAACCTCAGAATCACCATTGAAAGAAACCCTCCACAGTCACGCCTAGCTGAGTTGAATATCAAGTGCTGGCCCAAGTGGGGTTGTTCTCCAGGGAAGTACCAGTTGAAATTTGATGCAGAAGAGACATGCTACTTGGTGAAAGGAAAGGTGAAAGCTTTCGTAAAAGGGTCATCAGAGTTTGTGGAGTTTGGAGCAGGGGACCTTGTCACCATTCCAAAAGGACTCAGTTGCACTTGGGATGTGTCTGCTGCAGTGGATAAGTACTACAAATTTGAATCAAATTCTTCTGCTGCATCATCATCATCTTGTTAA 333 0.4414 MAADSNSNLRITIERNPPQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLVKGKVKAFVKGSSEFVEFGAGDLVTIPKGLSCTWDVSAAVDKYYKFESNSSAASSSSC 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02193 110 SUPERFAMILY RmlC-like cupins 17 96 IPR011051 -
Viun1g02193 110 Gene3D Jelly Rolls 2 98 IPR014710 -
Viun1g02193 110 CDD cupin_TM1112-like 30 98 - -
Viun1g02193 110 PANTHER OS04G0445200 PROTEIN 6 99 - -
Viun1g02193 110 Pfam EutQ-like cupin domain 23 96 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02193 Viun-Chr1 33029470 33030246 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02193 - - pvu:PHAVU_001G167300g 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02193 1 33029470 33030246 Viun1g02193 1 33029470 33030246 ECH
Viun1g02193 1 33029470 33030246 Viun7g01225 7 13876052 13876929 PCT