Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01215 ATGTGGAACCTCTGCGCTGTTATTCCCAATGCTTCTTCAACCTTCACATTCAGCGTTCAACATCATTCACTTCTCAACTTCTTCAATAGAAGGAGAAGGCCTCGCTGCAGGGTCACCATGTCCTCCGATCCTCAAAACGCCGTCGTTGTGGGATGTGGAGGAGTGTCTATCGATTTCTTGGCCAGCGTGGCCGCTTATCCTAAGCCAGATGACAAAATCAGAACCACAAATTTGAAGGTTCAAGGAGGTGGCAATGCTGGAAATGCCTTAACCTGCCTTGCTCGCTTGGGCCTAAACCCAAGGCTTATTTCCAAGGTTGCTGATGACAGTCAAGGCAGGGGTATATTAGACGAGCTGCGAGCTGATGGTGTAGATACATCCTTTATAGTGGTGTCTAAGGAGGGAACATCACCATTTACATATATTATTGTCGACAACCAAACGAAGACCCGTACTTGTATACATACCCCAGGATATCCTCCAATGATACCAGACAACCTGCCAAAATCAAGTTTGTTATCTGCATTGGATGGAGCGAAAATTGCTTATTTTGATGGCAGGTTGCCTGACACTGCTCTACTTGTTGCCCAAGAGGCAGTTAAAAAGAATATACCCATCTTAATTGATGCAGAAAGGCCAAGGGAAGGGTTGGACGATCTCCTAAAACTAGCTGATTATGTTGTATGCTCAGCGAAGTTTCCAAAGGCATGGACAGAGGCATCCACTGTTCCACAAGCACTTGTTTCTATGCTTTTAATGTTGCCCAACATAAAATTTGTGATTGTAACTTTGGGAAAAGATGGATGCATAATGCTGGAGAGAAGGGTTGATGCAGGTCCTTCTGCAGAAGAAGTGGATGCAGACACCTTATTGGAATCATTGGAGTTAAAAAGGAATAAGAGTCTATCCACTCCAACCTGCATATCATCATCAGTGGCGAAATTGAAGGCAGAGCGGATAGGAACAGTTAGTGCGAAGTTATATGTTGGAACAGCAGAGAGTATTCCACAGTCAGAGCTTGTTGATACCACTGGTGCTGGGGATGCTTTTATTGGGGCTGTAATCTATGCTATCTGTGCCAAGTTTACACCAGAGACAATGCTATCCTTTGCTGCTAATGTGGCAGGTGCCAAGTGCAGGGATCTAGGAGCACGGAGTGGTCTTCCTTACCGTGCGGATCCACGCATAGAATCCTTTATATTGGAGAAATTGATTACTTCATCTTAA 1227 0.4482 MWNLCAVIPNASSTFTFSVQHHSLLNFFNRRRRPRCRVTMSSDPQNAVVVGCGGVSIDFLASVAAYPKPDDKIRTTNLKVQGGGNAGNALTCLARLGLNPRLISKVADDSQGRGILDELRADGVDTSFIVVSKEGTSPFTYIIVDNQTKTRTCIHTPGYPPMIPDNLPKSSLLSALDGAKIAYFDGRLPDTALLVAQEAVKKNIPILIDAERPREGLDDLLKLADYVVCSAKFPKAWTEASTVPQALVSMLLMLPNIKFVIVTLGKDGCIMLERRVDAGPSAEEVDADTLLESLELKRNKSLSTPTCISSSVAKLKAERIGTVSAKLYVGTAESIPQSELVDTTGAGDAFIGAVIYAICAKFTPETMLSFAANVAGAKCRDLGARSGLPYRADPRIESFILEKLITSS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01215 408 PRINTS Ribokinase signature 260 271 IPR002139 GO:0016301
Viun7g01215 408 PRINTS Ribokinase signature 51 72 IPR002139 GO:0016301
Viun7g01215 408 PRINTS Ribokinase signature 78 97 IPR002139 GO:0016301
Viun7g01215 408 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 34 400 - -
Viun7g01215 408 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 342 355 IPR002173 GO:0016301
Viun7g01215 408 SUPERFAMILY Ribokinase-like 49 393 IPR029056 -
Viun7g01215 408 Gene3D - 48 386 IPR029056 -
Viun7g01215 408 Pfam pfkB family carbohydrate kinase 331 389 IPR011611 -
Viun7g01215 408 Pfam pfkB family carbohydrate kinase 53 274 IPR011611 -
Viun7g01215 408 CDD ribokinase_group_B 48 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01215 Viun-Chr7 13808756 13814444 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01215 - - var:108324097 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02205 1 33088153 33094502 Viun7g01215 7 13808756 13814444 PCT