Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02205 ATGATGTCGAAGGTGTTCAGCGTAACCAATGGCAGCGTCCTCCACAATCTTGACACACATAGTCGCTTCCAGCGCCGTTTCAATTTAATCAAAATGTCCTCCGACGCGCTTCCTCCTCTTCCCGAAAATCGCATCGTCGTCGGGCACGGAATGACGGCGGTGGATTTCCTTGCTACGGTGGACCGATTTCCGAACCCCGACGATAAGGTCCGAAGCTGTTCGCTAAAGGTTGAAGGAGGCGGCAATGCCGGTAATGCGCTCACTTGCGTGGCTCGGCTCGGCTTGAAGCCGAAGGTGATCTCCAAGATTGCGGACGATGCGCACGGCTTCGCTATATTGAAGGAGCTGGAAGCCGATGGCGTCGATACTAGCTTCATTGTTGTATCCAAGGGTGGTAGCTCAACGTTTTCTTATGTACTAGTAGACAACCAAACAAAAACACGCACCAGTATCTACACACCTGGAGATCCTCCCATGATGCTAGATGACCTACCCCAGTCAACATTATTATCTGCATTCGATGGAGCAAGATTAGTTTATTTTGATGGAATGTTTCCCGAAACTGCTCTATTTGTTGCGCAAGAGGCAGCTCGTAATAATATTCCTATTTTAGTTGAGGCAGAATCACCAAGAGAAGGGTTGGATGAGCTCATGAAGCTAGCTGATTTTGTTGTATGCTCTTCCAAATTTCCACAGGCTTGGACGCAAGCACCATCTATCGCGAGTGCACTGGTTACCATGCTTTTAAGATTTCCAAATATCAACTTTGTAATTGTGACTTTGGGTGAAGATGGTTGTCTAATGTTAGAAAGATGTGAAAATGAGGATGCTGACATAGAAGAAGTGGATGTAGAGAGTTTCTTAGAATTCTTATATAAAGGGAAACGTGATAGCTTGACTATCCCAACCTGCATACCATTGGCAGTGAAGAAATTCAGAGCAAATGGAATTGGAACAATTTGTGGGAGATTCTATATTGGAACAGCAGAGAAGATACCAGATTCTGAGCTGGTTGACACAACTGGTGCTGGGGATGCATTTATTGGAGCGATTATGTATGAGTTCTTAAAAAGGTGCTGA 1080 0.4546 MMSKVFSVTNGSVLHNLDTHSRFQRRFNLIKMSSDALPPLPENRIVVGHGMTAVDFLATVDRFPNPDDKVRSCSLKVEGGGNAGNALTCVARLGLKPKVISKIADDAHGFAILKELEADGVDTSFIVVSKGGSSTFSYVLVDNQTKTRTSIYTPGDPPMMLDDLPQSTLLSAFDGARLVYFDGMFPETALFVAQEAARNNIPILVEAESPREGLDELMKLADFVVCSSKFPQAWTQAPSIASALVTMLLRFPNINFVIVTLGEDGCLMLERCENEDADIEEVDVESFLEFLYKGKRDSLTIPTCIPLAVKKFRANGIGTICGRFYIGTAEKIPDSELVDTTGAGDAFIGAIMYEFLKRC 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02205 359 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 339 352 IPR002173 GO:0016301
Viun1g02205 359 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 31 357 - -
Viun1g02205 359 Gene3D - 45 359 IPR029056 -
Viun1g02205 359 PRINTS Ribokinase signature 48 69 IPR002139 GO:0016301
Viun1g02205 359 PRINTS Ribokinase signature 257 268 IPR002139 GO:0016301
Viun1g02205 359 PRINTS Ribokinase signature 75 94 IPR002139 GO:0016301
Viun1g02205 359 Pfam pfkB family carbohydrate kinase 46 274 IPR011611 -
Viun1g02205 359 Pfam pfkB family carbohydrate kinase 330 357 IPR011611 -
Viun1g02205 359 SUPERFAMILY Ribokinase-like 46 356 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02205 Viun-Chr1 33088153 33094502 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02205 - - gmx:100792838 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02205 1 33088153 33094502 Viun1g02205 1 33088153 33094502 ECH
Viun1g02205 1 33088153 33094502 Viun7g01215 7 13808756 13814444 PCT