Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01105 ATGAATGTGGTTGGAAAAGTTGGAAGCTTGATATCTCAAGGTGTGTACTCAGTCGCAACCCCTTTTCACCCCTTTGGTGGAGCTGTTGATGTGATTGTTGTTCAGCAACAAGATGGGACATTTCGGAGTACGCCTTGGTATGTTCGATTTGGTAAATTTCAGGGTGTTCTCAAAGGTGCGGAAAAGTATGTTAAGATAAATGTTAATGGTGTTGAGGCCAATTTTCATATGTGTCTTGACAACTCAGGGGAGGCTTATTTCTTGAAGGAGGTGGATGATGATAAAGTGATAGATTCAATTGAGGTTGTTCAAGATTCCATTGACAAAAAGAATGGCTTTTTGGGTAATGTTCATAGACTTGATCATAGCATCTCGGATTCTGGGGTTCTGAAGTTGAAAGATGAGTGTGATTCCTCAGTTGTGCGTGCGTCTCAAATTCAAAGGTCGGAATCTGATATTGATAGGAGATTTTATGAATTCCCAGATGATCGATCTTCTTTAGAAGATTCAGTTGAGTTGTCAGAATACGACTCTAATTACGGGAGCTTAGAGGGAGACAATTTTGCAGAGTCACAGGGTGCACATCCAGAGATGGTCTTGGTGAGTGTTGATGGTCATATATTAATGGCCCCTATCTCAGAAACAGAGACTCAGGAAAATGTGCAATTAAAAACTCCTCAATTTCATCTGGGACCAGGTGAAGAGACTGACTTATGTGAAGGCAATGGAGAGATTGGTGAAAATGCTTGGGCTACTGATTATATTAGTCAGCGTGACGCTCAAACAACTGATGTCGATCCTAGATGTTGTAACATTAATGGTGACGATAATACTTTTAAGCTCTCACACGAAGTTTGTCAAAGAGAGGAGGTACATATTAGTCAGACACAGGAATCCTTAGAGATTAAAAATCCGGAAGATCGGGTGAAAACTGATTCAGAAGTGGCTGCATCTGGTATCAATAGGGAGAGTGTTTTCAAAAGCTGTTTGGAGCTGCACCATTTCGGTCAGCAGGCTGGAAATGCTGCTGATTTACAAGATACAGGTTCTCCATTGGGGATTCAAAATTCAGCAGATCAATCTAATGGAAGTTGTTTTGTAGTTAATGAAGATGAACAAGGGAGGATTGTGCAACCTAGAAGCGGCGATGATTTATCACCTCCTGGTTATTCCATTTCTTCTAATGGCTATGGATATCCAAAATCAGAATTGGAAATTCAAGAGGTTGAGAAAAATGCATCTGGAGAAGTTGAAACTGATCCTGGCTATCGTTCAATTATTACTGAAACAGAACAGAATAATGAACATGTTGTCAAGTCAGTGTCAAATAATTCGGTAGATGAGAGTCAACAAGCCCCTTCACTCAAAGATGTCAGGGCTACATGTGAGGTAGTGGAACCTCAAACAGAAACTTCAAATAAAGGGGACCAAAGCCACTTGGGTTTGGGATTTGAGATTTCACTTTGTGGCCATGAACTTAAGCTGGGCATGGGTTCAGTGGCTGCTGCTGAAGTGTTTGAAGCGCATCGCATATCTTCAGTTGACTTCACAAGTTCTGCTCCTTCAATAATTAAAAATCCAAATCTTGTTATCAAGTTTAAAGAGAGGTACATGACGTGGGAAAAGGCTTCTCCTCTTGTTCTTGGAATGGCTGTTTATGGTTTAGATTTACCTGTTGAGCCCAAAGATACGGTTCCTGTGGAACAGGATCAAGCATTGAAGTCTAGGGATAATGATCTAGGATCATCTTCAGCTGGGCGCAGATGGAGACTGTGGCCTATTCCTTTCCGAAAGGTCAAAACATTTGACCATACTAATAGCAATACATCAAATGAGGAGGTGTTTCTTGATTCTGAGTCTGGATCTTTTGCAAACCAAACTACTCCAACATCCAGTTCCCAGGGGTCTCCTGGAAAGCAATTTCTAAGAACAAATGTTCCCACTAATGAGCAGATAGCATCCTTAAACCTCAAAGATGGTCAAAATTTGGTAACATTCAGTTTCTCTACAAGGGTTCTCGGTACACAACAGGTTGATGCTCATATCTATTTATGGAAGTGGAATGCAAGAATTGTTATTTCAGACGTTGATGGGACTATTACCAAGTCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGCAAAGATTGGACGCAATCTGGAGTAGCCAGGCTTTTCTGTGCCATTAAGGAAAATGGATACCAGCTACTTTTTCTGAGTGCCCGTGCCATTGTCCAGGCATATCTAACTAGAAATTTCTTGTTCAACTTGAAACAGGATGGAAAAACCTTACCAAATGGACCTGTTGTTATCTCACCTGATGGATTATTTCCCTCACTTTACCGAGAAGTGATACGAAGGGCACCACATGAATTCAAGATTGCTTGTTTAGAGGATATCAAAAAGCTTTTCCCTTCTGACTATAACCCATTCTACGCTGGATTTGGAAATAGAGATACAGATGAGCTCAGTTACAGAAAGATTGGCATCCCGAAGGGAAAAATATTTATTATTAACCCTAAGGGTGAGGTAGCTATTAGTCACCGAATTGGTGCAAAGTCATATACATCATTACACACCCTTGTGAATGACATGTTTCCACCAACTTCTTTGGTCGAGCAGGAGGACTACAACTCATGGAACTATTGGAAAACCCCATTGCCAGATTTAGATTAG 2676 0.4088 MNVVGKVGSLISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKYVKINVNGVEANFHMCLDNSGEAYFLKEVDDDKVIDSIEVVQDSIDKKNGFLGNVHRLDHSISDSGVLKLKDECDSSVVRASQIQRSESDIDRRFYEFPDDRSSLEDSVELSEYDSNYGSLEGDNFAESQGAHPEMVLVSVDGHILMAPISETETQENVQLKTPQFHLGPGEETDLCEGNGEIGENAWATDYISQRDAQTTDVDPRCCNINGDDNTFKLSHEVCQREEVHISQTQESLEIKNPEDRVKTDSEVAASGINRESVFKSCLELHHFGQQAGNAADLQDTGSPLGIQNSADQSNGSCFVVNEDEQGRIVQPRSGDDLSPPGYSISSNGYGYPKSELEIQEVEKNASGEVETDPGYRSIITETEQNNEHVVKSVSNNSVDESQQAPSLKDVRATCEVVEPQTETSNKGDQSHLGLGFEISLCGHELKLGMGSVAAAEVFEAHRISSVDFTSSAPSIIKNPNLVIKFKERYMTWEKASPLVLGMAVYGLDLPVEPKDTVPVEQDQALKSRDNDLGSSSAGRRWRLWPIPFRKVKTFDHTNSNTSNEEVFLDSESGSFANQTTPTSSSQGSPGKQFLRTNVPTNEQIASLNLKDGQNLVTFSFSTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVARLFCAIKENGYQLLFLSARAIVQAYLTRNFLFNLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIGAKSYTSLHTLVNDMFPPTSLVEQEDYNSWNYWKTPLPDLD 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01105 891 SMART lns2 691 847 IPR031315 -
Viun7g01105 891 MobiDBLite consensus disorder prediction 376 399 - -
Viun7g01105 891 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 484 590 IPR031703 -
Viun7g01105 891 SUPERFAMILY HAD-like 683 833 IPR036412 -
Viun7g01105 891 PANTHER LIPIN 1 891 IPR026058 -
Viun7g01105 891 Pfam lipin, N-terminal conserved region 1 96 IPR007651 -
Viun7g01105 891 Pfam LNS2 (Lipin/Ned1/Smp2) 645 867 IPR013209 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01105 Viun-Chr7 11876293 11885444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01105 K15728 - gmx:100795884 1497.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01105 7 11876293 11885444 Viun7g01105 7 11876293 11885444 ECH
Viun1g02285 1 33698523 33706061 Viun7g01105 7 11876293 11885444 PCT