Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02285 ATGGATGATAGAGTTGGTCACAGATTTGATCATAGCATATCTGATTCAGGGGTGCGGTATCTTACTGGTGAAGGCCATTCCTCGGTTTTGTCACAACTTCAAAGGGCAGAATCTGATGTCGATAGGAGGTTTTATGAGTTCCCAGATGATCAATCATCTTTTGAAGGTTCACTTGATGTTTCGGAATATGATTCTACAAGATATGAGAATCTAGATGCGGATAATTTTATGGACACACAGGGCTCCCATCCAGAGGTGGTTTTGGTCAGTGTTGATGGTCATGTATTGACGGCCCCTATCTCAGAATCGGAGCAGAATGAGGACAATGTTCAGTTAAAAAATCCTCAATTTCATCTAGGCCCAGGTGAAGAGACTGACTTCTTTGAGGGCAATGGGGAACTTATTTCTGATGAAAATGCTTGGACTGCTGATTATGCTACTCCACTGGATGCTCCTAGTAGTTATGACACTAAGGTAGATGATGATACTTCCGGGCTCTTGTTGGAAGCTCAAAGACAGGAGGAAATTAATTGTAGCACTGAGGAAACCTTAGTGATTGAAAATCAAGAAAATCATCTTTTGCAAACTGATTCAGAAGAGGCTGTATCTTGTATGAAGAGAGAGAGTGTCTTCAAAAGTTGTTTGGAATTACGTGAGTTTACTCAGCAGGCTGGAAACGATGATTTACAAGATGTGGATTCTTCATTGGAGGTTCAAAATTCAGCAGAGGAATCTAATGCACATATTTCAATTACTGATGAGAATAAAGACGAAAACATTCAGGTTGATATACAAGATGTAGGTTCTTCACTGGAGGTTCGATATATTGCAGAGAAATGCATTGCAAATGGTTCAATTACTGATGAAAATAAACAAGGAAACATCGAACAATGTAGAAAAAGTGACAAGTTATCTCCCCTTAGTGCGCCTTCTTCCTTGGATGACCATAGTTCTCCAGAATTAAAAGTAGAACCTCAAGTGGTTGATAGAGATGCATCAGTGAACGTTGACACTGGTTCTGACAGTCATTCTGGCACTAAAGATGTTATTGAATGTAATGATGAACGTGTTGGAGAGTCGGTAACAAATGATCAGGTAGATGATAGTGAACGAACTCCTGCAATTGAAGATGGCAGTAAGAAAACTGAACTCACTGAACCTCAAATTGTAACTTCCATTGACGAGGACCAATGTCATTCTGCTTTGAGATTTGAGGCCTCACTTTGTGGTCACGAACTTAAGGTGGGTATGGGTTTGGTTGCTGCTGCTGAGGTTTTTGAAGCACATCGGATATCTGCAGAGGAATTTAGAAGTTCAGCATCATCCATAATTAAGAATGAAAATCTGGTTTTGAAGTTCAGAGACACGTATCTGCGGTGGGAAAAGGCTGCTCCTCTTGTCCTTGGAAAGACTGTATTTGGTTTAGACTTACCTGTTGATCCCAGAGATACAATTCCAGTGGGACAGGATGATGCAGTAAAGGCTACAAATGAAGGTTCTGGGCCAGCTTCATCTGGACGCAGATGGAGACTTTGGCCTATTCCTTTTAGAAGAGTCAAGACAATTGAGCACACTGATAGTGAATCAAATGAGGATGTATTTGTAGATTCCGAGTCTGATTGGCAAACTTCTACTGTTGAACCTTCTCCAACATCTGCTAGGCACGAGTCTCCTCGCAAGCAATTCGTGAGGACAAATGTTCCATCGAATGAGATGATAGCGTCCTTAAATCTCAAGGATGGTCAAAATTTGGTAACCTTCAGTTTCTCTTCCAGGGTTCTTGGAAAACAGCAGGTTGATGCTCATATTTACTTATGGAAGTGGAATGCACGAATTGTAATTTCAGATGTAGATGGAACTATTACCAAATCTGACGTTTTAGGGCAGGTCATGCCTTTAGTTGGCAGAGATTGGACACAGTCTGGAGTTGCAAGGCTTTTCTCAGCTATTAAAGAAAATGGATACCAGCTACTGTTTTTGAGTGCCCGTGCTATTGTCCAAGCTTATCTTACCAGGAGCTTTTTGGTTAACCTGAAACAGGATGGCAAGACCTTACCCAATGGACCTGTTGTTATTTCTCCAGACGGACTATTTCCCTCTCTTTACCGAGAAGTAATAAGAAGGGCACCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAACCCATTCTATGCCGGGTTTGGCAATAGAGACACTGATGAACTTAGTTACAGGAAGATTGGAATCCCGAAGGGCAAGATATTTATCATCAATCCCAAGGGTGAAGTCGCAACAAGTCACCGTATTGATTCAAAATCCTACACATCATTACACACACTCGTCAATGACATGTTCCCTCCCACTTCCTTGGTTGAGCAGGAGGATTTCAACTCATGGAATTATTGGAGAATGCCTTTTCCAGAAGTGGATTAG 2439 0.4125 MDDRVGHRFDHSISDSGVRYLTGEGHSSVLSQLQRAESDVDRRFYEFPDDQSSFEGSLDVSEYDSTRYENLDADNFMDTQGSHPEVVLVSVDGHVLTAPISESEQNEDNVQLKNPQFHLGPGEETDFFEGNGELISDENAWTADYATPLDAPSSYDTKVDDDTSGLLLEAQRQEEINCSTEETLVIENQENHLLQTDSEEAVSCMKRESVFKSCLELREFTQQAGNDDLQDVDSSLEVQNSAEESNAHISITDENKDENIQVDIQDVGSSLEVRYIAEKCIANGSITDENKQGNIEQCRKSDKLSPLSAPSSLDDHSSPELKVEPQVVDRDASVNVDTGSDSHSGTKDVIECNDERVGESVTNDQVDDSERTPAIEDGSKKTELTEPQIVTSIDEDQCHSALRFEASLCGHELKVGMGLVAAAEVFEAHRISAEEFRSSASSIIKNENLVLKFRDTYLRWEKAAPLVLGKTVFGLDLPVDPRDTIPVGQDDAVKATNEGSGPASSGRRWRLWPIPFRRVKTIEHTDSESNEDVFVDSESDWQTSTVEPSPTSARHESPRKQFVRTNVPSNEMIASLNLKDGQNLVTFSFSSRVLGKQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQVMPLVGRDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRSFLVNLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVATSHRIDSKSYTSLHTLVNDMFPPTSLVEQEDFNSWNYWRMPFPEVD 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02285 812 MobiDBLite consensus disorder prediction 486 506 - -
Viun1g02285 812 MobiDBLite consensus disorder prediction 536 552 - -
Viun1g02285 812 SUPERFAMILY HAD-like 604 754 IPR036412 -
Viun1g02285 812 MobiDBLite consensus disorder prediction 299 315 - -
Viun1g02285 812 MobiDBLite consensus disorder prediction 292 348 - -
Viun1g02285 812 Pfam LNS2 (Lipin/Ned1/Smp2) 567 788 IPR013209 -
Viun1g02285 812 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 405 511 IPR031703 -
Viun1g02285 812 PANTHER LIPIN 37 812 IPR026058 -
Viun1g02285 812 SMART lns2 612 768 IPR031315 -
Viun1g02285 812 MobiDBLite consensus disorder prediction 527 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02285 Viun-Chr1 33698523 33706061 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02285 K15728 - gmx:100780784 1270.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02285 1 33698523 33706061 Viun7g01105 7 11876293 11885444 PCT