Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00999 ATGTTCAAGAAAATCATGAAAGGCGGGCACAAGAAGCCCTCCAAGTCCGACGCAAGCGATCCCGCGGCTGCGGCGTACGCTGCCGCCAACCGCAACATGCCAGCGGTGCCCTCGCCCAATGTCGTCGTGAACCATGCCTCGCGCGGAACTGGAGGTGCCGCGCCTCCTAGCTCCGGCACCGCGATGCCGCTTGTGCCTACCCCCGGGGCCATGGAGCCTTTGCCGCCGTTCCGCGACACGCCGGTCGCTGACCGGCAGAACCTCTTCCTCCGGAAGCTCCACATCTGCTGCTACGTCCTGGACTTCTCCGACACGCTGAAGAACGTTAGAGAGAAGGAAATCAAGCGCCAAGCGCTGATGGACCTCGTCGACTTCATCCAATCCGGCTCAGGCAAGATGTCGGAGCATTGCCAGGAGGAGATGATCAGAATGATCTCAGTCAACATTTTCCGGAGCCTTCCTCCGGCGTCTCACGAGAACACCGGCCAGGAACCCACCGATCCTGAAGAGGAAGAACCAAGCATGGATCCGACCTGGCCTCACCTTCAGCTCGTCTACGAGCTTCTCCTCAGATACGTGGTTTCCTCTGATACCGATACGAAAATCGCAAAACGGTATATTGATCACTCCTTTGTTCTCAAATTGCTTGATTTGTTTGACACTGAGGACCCGCGGGAGAGGGAGTATTTGAAAACCATACTGCATCGTATATACGGGAAATTCATGGTGCATAGACCGTTTATTAGAAAGGCTATTAACAACATTTTTTATCGGTTCATATATGAGACTGAGCGGCACGCCGGTATTGGAGAGCTTCTGGAGATTCTCGGGAGCATTATTAATGGGTTTGCGCTGCCCATGAAGGAGGAGCACAAGTTGTTTCTGGTGAGGGCCCTTCTGCCTCTGCATAAACCGAAATGTGTGTCCATGTACCACCAGCAGTTGTCTTACTGCATTACTCAGTTTGTGGAGAAGGATTTCAAGCTGGCAGATACGGTGATTAGGGGGTTGTTGAAGTATTGGCCTCTTACCAATTGCCAGAAGGAGGTTCTCTACCTCGGAGAACTGGAGGAAGTGCTGGAGGTCACGCAGGCTGCGGAGTTTCAAAAATGTATGGTTCCGCTTTTTAGACAGATTTCACGCTGCCTCAATAGCTCTCACTTTCAGGTTGCAGAACGAGCCCTGTTTTTGTGGAACAATGAGCATATCGTGAGCTTAATTGCCCAAAACAGGACGGTGGTACTACCAATAATATTTGAAGCATTTGAGAGAAACATCTCGAGTCATTGGAATCAAGCAGTACATGGACTGACAGTGAATGTTCGGAAAATGTTCCTGGAAATGGATGCAGAATTGTTTGAAGAGTGCCAGCGGCAGCACGCAGAGAAAGAGGCTAAAGCGAAAGATGTAGAAGAGCAGCGGGAACTTAATTGGAAGAGACTGGAAGATGCGGCTGCACAGAATGGATTTGAGGACATGCTCTTAACTTAG 1491 0.5117 MFKKIMKGGHKKPSKSDASDPAAAAYAAANRNMPAVPSPNVVVNHASRGTGGAAPPSSGTAMPLVPTPGAMEPLPPFRDTPVADRQNLFLRKLHICCYVLDFSDTLKNVREKEIKRQALMDLVDFIQSGSGKMSEHCQEEMIRMISVNIFRSLPPASHENTGQEPTDPEEEEPSMDPTWPHLQLVYELLLRYVVSSDTDTKIAKRYIDHSFVLKLLDLFDTEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHAGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKCVSMYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPLTNCQKEVLYLGELEEVLEVTQAAEFQKCMVPLFRQISRCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVVLPIIFEAFERNISSHWNQAVHGLTVNVRKMFLEMDAELFEECQRQHAEKEAKAKDVEEQRELNWKRLEDAAAQNGFEDMLLT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00999 496 Coils Coil 453 473 - -
Viun7g00999 496 SUPERFAMILY ARM repeat 86 467 IPR016024 -
Viun7g00999 496 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Viun7g00999 496 Gene3D - 81 484 IPR011989 -
Viun7g00999 496 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 81 484 - -
Viun7g00999 496 MobiDBLite consensus disorder prediction 38 59 - -
Viun7g00999 496 MobiDBLite consensus disorder prediction 1 23 - -
Viun7g00999 496 MobiDBLite consensus disorder prediction 155 175 - -
Viun7g00999 496 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 74 485 IPR002554 GO:0000159|GO:0007165|GO:0019888
Viun7g00999 496 PIRSF PP2A_B56 4 493 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00999 Viun-Chr7 10252411 10258431 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00999 K11584 - gmx:100795277 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00999 7 10252411 10258431 Viun7g00999 7 10252411 10258431 ECH
Viun1g02406 1 34522262 34528554 Viun7g00999 7 10252411 10258431 PCT