Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02406 ATGTTTAAGCGAATCATGAAGGGAGGGCAGAAGAAGCCCTCCAAGACGGACCCGAACGATCCGTCCGCCTTCGGTTCGCCGGCGACGGCCGATGCTCCGGCGGTGGTGGTGCCGCCGCCTCCGGGGACCATAGAGCCGCTGCCGCTGTTCCGCGACGTGCCTGTGTCGGAGCGGCAGACCCTGTTCATCCGTAAGCTTCAGATATGCTGCCACCTGCTGGACTTCTCGGACACGCTGAAGAACATTCGCGAGAAGGAAATCAAGAGGCAGACGCTGATGGAGCTCGTGGATTTCATCCAATCGGGTTCGGGGAGGATAACGGAGATTTGCCAGGAGGAGATGATCAAAATGGTGTCCGTCAATATCTTCCGGTGCCTCCCGCCGGCGGCGCACGAGAACACCGGACAGGAAGCCACCGATCCGGAGGAAGAGGAGCCGTGCCTCGATCCTGCATGGCCGCACCTTCAGCTTGTCTACGAGCTTCTTCTCAGATACATCGTTTCCTCTGATACTGACACAAAGGTTGCGAAACGGTACATTGATCATTCTTTTGTCCTCAAACTGCTTGATTTGTTTGACTCTGAGGACCCCCGTGAACGTGAGTACTTAAAAACCATATTACATCGCGTGTACGGGAAATTCATGGTTCATCGCCCCTTTATCAGGAAGGCCATTAACAACATATTTTTTCGGTTTATATATGAGACGGAGCGGCATAGCGGTATTGGGGAGCTTCTTGAGATTCTGGGGAGCATTATCAATGGCTTTGCTCTGCCGATGAAAGAAGAACATAAGCTGTTTCTATCGAGGGCGCTTCTGCCTCTGCATAAGCCCAAGCCGGTTGGGGTGTATCACCAGCAGTTGTCGTATTGCATTGCGCAGTTTGTGGAGAAGGATTTCAAGCTCGCGGATGCAGTTATTAGGGGCTTGTTGAAGTATTGGCCCGTAACTAATTGCCAGAAGGAGGTTCTCTTTCTTGGGGAACTGGAGGAGGTGCTGGAGGCCACGCAAGCTGCGGAATTCCAACGCTGCATGGTCCCTCTTTTTAGACAGGTTGCTCGCTGCCTCAATAGTTCTCACTTTCAGGTTGCAGAACGAACTCTCTTTTTGTGGAATAATGAGCACATTGTCAGCTTAATTGCCCAAAACAGGACTGTAGTATTACCCATAATATTTGAAGCACTGGAGAAAAATATCCAGAGTCATTGGAACCAGGCTGTTCACGGGCTGACCGTGAACGTTCAGAAAATGTTCATAGAAATGGACGCAGAATTATTTGAAGAATGTCAGAGACAGTATGCAGAGAGGCAGGCTAAAGCAAAAGATTTAGAAGAGCAGCGGGAATTGAATTGGAAAAGACTGACAGATGCAGCTGCACAGAATGGGGTGGATATGGTCACAGCTTAG 1407 0.5068 MFKRIMKGGQKKPSKTDPNDPSAFGSPATADAPAVVVPPPPGTIEPLPLFRDVPVSERQTLFIRKLQICCHLLDFSDTLKNIREKEIKRQTLMELVDFIQSGSGRITEICQEEMIKMVSVNIFRCLPPAAHENTGQEATDPEEEEPCLDPAWPHLQLVYELLLRYIVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRVYGKFMVHRPFIRKAINNIFFRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLSRALLPLHKPKPVGVYHQQLSYCIAQFVEKDFKLADAVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVPLFRQVARCLNSSHFQVAERTLFLWNNEHIVSLIAQNRTVVLPIIFEALEKNIQSHWNQAVHGLTVNVQKMFIEMDAELFEECQRQYAERQAKAKDLEEQRELNWKRLTDAAAQNGVDMVTA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02406 468 MobiDBLite consensus disorder prediction 1 38 - -
Viun1g02406 468 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 47 458 IPR002554 GO:0000159|GO:0007165|GO:0019888
Viun1g02406 468 Gene3D - 54 457 IPR011989 -
Viun1g02406 468 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 36 462 IPR002554 GO:0000159|GO:0007165|GO:0019888
Viun1g02406 468 SUPERFAMILY ARM repeat 59 440 IPR016024 -
Viun1g02406 468 PIRSF PP2A_B56 31 466 IPR002554 GO:0000159|GO:0007165|GO:0019888
Viun1g02406 468 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 54 457 - -
Viun1g02406 468 Coils Coil 426 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02406 Viun-Chr1 34522262 34528554 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02406 K11584 - gmx:100798308 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02406 1 34522262 34528554 Viun1g02406 1 34522262 34528554 ECH
Viun1g02406 1 34522262 34528554 Viun7g00999 7 10252411 10258431 PCT