Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00994 ATGGGCATACTCTACGACGACGTGGTGATCATAAGCCAACCACAAAAAGACGGCGACCCAACTGTTCTCACTGTCAATTGCCCTGACAAAACTGGTCTGGGATGTGATTTGTGCCGTATCATACTTTTCTTTGGTCTCAACATACTCAGAGGAGATGTTTCAACGGATGGAAAATGGTGCTACATAGTTTTCTGGGTGGTTGGGAAACACAAGACGAGGTGGAGTTTGCTGAAGACGAGGCTGATTGAGGCATGTCCTTCTTGCTCCTCGGCTTCTGGAATCTCTTATTATCGATCTGAGTTGCAGCCCTCCAAGCCCCCTGATGTCTTTCTTTTGAATTTTTGCTGTCATGACCGGAAAGGGCTTTTGCATGATGTTACTGAGGTTCTTTGTGAGTTAGAACTTACTATAAAGAAAGTGAAGGTATCTACTACACCTGATGGCAAAGTGATGGATCTGTTTTTCATCACAGATACCAGAGAACTTCTACACACAAAGAAGAGAAAGGACGAAACAATTGAACATCTAACAGAGATTTTGGGGGATGCCATCATTTCTATTGACATAGATTTGGTTGGCCCAGAAATTACAGCTTGTACCCAGGCATCTCCATTACTTCCAACTGCAATCACAGAAGATGCCTTTGATTTGGAATTGCCCGATTCGGCTCGGGGAGGAACTCTGAGGTCAGATTATGTTTCTGTAATGATGGACAATACGCTTAGTCCTGCTCACACCCTTGTCCAAATTATGTGCCAAGATCACAAAGGTCTACTTTATGACATCATGAGAACTCTGAAAGACTACAACATTCAGATTTCTTATGGGCGTTTCACTACAAAACCTAGAGGGAAATGTGAGATTGACTTGTTCATCATGCAAGCAGATGGCAAAAAGATTGTTGACCCACACAAGCAGAATTCATTGTCATCACGCCTTAGAATGGAACTATTTCGACCACTCAGAGTAACCATTGTGAGTAGGGGCCCGGATACCGAGCTTCTGGTCGCAAATCCGGTGGAGTTATCTGGCAAGGGCCGGCCTCTTGTTTTCTATGATATCACTCTTGCACTCAAAATGCTAGGCATTTGCATCTTTTCGGCTAAAGTTGGAAGACACGTAATTGGAGATCGTGAGTGGGAGGTTTATAGAGTCTTGCTTGATGAAGGGGAGGGGCTATCTTTTCCAAAGAACAAGATTGAGGAGGGAGTTTGGAAAATGGTGATGGGTTGGGAGTAA 1239 0.4399 MGILYDDVVIISQPQKDGDPTVLTVNCPDKTGLGCDLCRIILFFGLNILRGDVSTDGKWCYIVFWVVGKHKTRWSLLKTRLIEACPSCSSASGISYYRSELQPSKPPDVFLLNFCCHDRKGLLHDVTEVLCELELTIKKVKVSTTPDGKVMDLFFITDTRELLHTKKRKDETIEHLTEILGDAIISIDIDLVGPEITACTQASPLLPTAITEDAFDLELPDSARGGTLRSDYVSVMMDNTLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFTTKPRGKCEIDLFIMQADGKKIVDPHKQNSLSSRLRMELFRPLRVTIVSRGPDTELLVANPVELSGKGRPLVFYDITLALKMLGICIFSAKVGRHVIGDREWEVYRVLLDEGEGLSFPKNKIEEGVWKMVMGWE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00994 412 SUPERFAMILY ACT-like 107 179 IPR045865 -
Viun7g00994 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 386 IPR040217 -
Viun7g00994 412 Gene3D - 108 191 - -
Viun7g00994 412 Pfam ACT domain 111 167 IPR002912 -
Viun7g00994 412 SUPERFAMILY ACT-like 244 295 IPR045865 -
Viun7g00994 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Viun7g00994 412 SUPERFAMILY ACT-like 19 78 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00994 Viun-Chr7 10149916 10153102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00994 - - gmx:100816138 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00994 7 10149916 10153102 Viun7g00994 7 10149916 10153102 ECH
Viun1g02404 1 34488380 34491179 Viun7g00994 7 10149916 10153102 PCT