Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02404 ATGGGGATACTGCACGACGACGTAGTGATTATCAGGGAGGCCGAGAAAGAAGGTGAAAGCACCGTAATAACAGTCAACTGCCCCGACAAGACCGGTCTAGGTTGTGATTTGTGTCGTATAATTCTCTTCTTCGGTCTTAGCATTGTAAGAGGAGATGTGTCCACTGATGGAAAATGGTGCTACATAGTTTTCTGGGTGGCGGGGAAGCAAAGGACTAGTTGGAGTTTGTTGAAGAAGAGGCTAATTGAGGCGTGTCCTTCTTGTTCCTCAGCTTCTGGGATTTCGTATTACCGTTCAGAATTGCAGCCTCCTAAGCCCTCTGATGTGTTCCTCTTGAAATTTTGTTGCCATGATCGAAAAGGCCTTTTACATGATATTACAGAGGTTCTTAGTGAGTTAGAGCTCATCATACACAAAGTGAAGGTTTCTACTACACCTGATGGAAGAGTGGTGGATCTGTTTTTCATCACGGATACCAGAGAACTCCTACACACAAAGAAGAGAACTGATGACACAATTGAACAGTTGTCAGTTGTTTTGGGGGATCCCTCAATTACCATTGACATTGAATTGGTTGGCCCAGAAATCACTGCTTGTTCTCAAGCATCTTCTTTCCTTCCAAGTGCAATCACAGAAGATATCTTTGATTTGCAATTACCTGATTCATTACAAAGCGGGACTTCCACATCTGATTCTGTTTCTGTTGTAATGGACAATTCGTTGAGTCCTGCTCATACGCTCGTCCAAATCATATGTCAAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGACTACAATATTCAGATTTCTTATGGGAGATTCTCAACAAAAACCAGAGGAAAATGTGAGCTTGACTTGTTCATAGTGCAAGCAGATGGGAAAAAAATAGTTGACCCGAACAAGCAGAAGTCTTTGTCATCACGCCTTAGGACTGAACTACTTCGTCCCTTCAGAGTAACCGTTGTAAGCAGGGGCCCTGATACGGAGCTGCTGGTTGCAAACCCTGTGGAGTTATCTGGCAAAGGACGACCCCTTGTTTTTTATGACATTACTCTTGCTCTCAAAATGCTTGGCCCCTGCATCTTTTCGGCTGAAGTTGGAAGACACGTGATTGGAGATAGGGAGTGGGAAGTTTATAGAATCTTGCTTGATGAGGGAGAGGGTTTATCTGTTCCGAGGAACAAGATTGAGAAAGGAGTTTGGAAGATGTTGATGGGTTGGGTGTGA 1239 0.4358 MGILHDDVVIIREAEKEGESTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVAGKQRTSWSLLKKRLIEACPSCSSASGISYYRSELQPPKPSDVFLLKFCCHDRKGLLHDITEVLSELELIIHKVKVSTTPDGRVVDLFFITDTRELLHTKKRTDDTIEQLSVVLGDPSITIDIELVGPEITACSQASSFLPSAITEDIFDLQLPDSLQSGTSTSDSVSVVMDNSLSPAHTLVQIICQDHKGLLYDIMRTLKDYNIQISYGRFSTKTRGKCELDLFIVQADGKKIVDPNKQKSLSSRLRTELLRPFRVTVVSRGPDTELLVANPVELSGKGRPLVFYDITLALKMLGPCIFSAEVGRHVIGDREWEVYRILLDEGEGLSVPRNKIEKGVWKMLMGWV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02404 412 SUPERFAMILY ACT-like 107 182 IPR045865 -
Viun1g02404 412 SUPERFAMILY ACT-like 244 298 IPR045865 -
Viun1g02404 412 Pfam ACT domain 112 168 IPR002912 -
Viun1g02404 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 8 400 IPR040217 -
Viun1g02404 412 ProSiteProfiles ACT domain profile. 247 330 IPR002912 -
Viun1g02404 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Viun1g02404 412 SUPERFAMILY ACT-like 18 81 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02404 Viun-Chr1 34488380 34491179 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02404 - - gmx:100818216 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02404 1 34488380 34491179 Viun1g02404 1 34488380 34491179 ECH
Viun1g02404 1 34488380 34491179 Viun7g00994 7 10149916 10153102 PCT