Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00865 ATGGAGGTTGCGGAGATGGATGGAAAGGAGCCACAAGTTGAGGTTCCTTTGGTACCTGCCACCCCTATTAAGCCTGTTCCTCTAAAACCAGTGCCGATCTACACGCCTGGGGTGATTAACCAAATGGGTTATCATGCAAATGGAGCTGTTGCATGTTATGAATTTTCAATTGGCCAGGAGAAATTGTGTAGGTCGGATGTTGGGTCAAACGTCGCCGAAGTTGGGTCAAACGTTGCCGGAGACAGTGGCAATACTTGTGAACATACAGCTTCGGATGCTGCTTCCAGCTTCAGCAAACTCGGGTTTTGTGATCATTTGTTCGCAGTTGAGGCTGAATCGAGGAACTCTAGTGTGACAAAAGGGTTTAATGAAGGATTGAACAATTCATTTGTTCCTTCTTTCATCCTTGACAATATTCGAGACCCTCAGGAAACATACATTGCTTGCTGTAGCAACAGAATTTCACAGGATACCCCATTTACACTTGACAATGCCAACAAAGAAAGCGGACAAATAGCATCAATGCAACATATGGAAGAAAATGATTCAGGAGGAAAAGAGAGAGATGGCCCTACTAGTACGCTTGACAATAATGTACTGCCAAGCAGCAAAGAACTCTGTGACCCTATCATGGAATTTGCTGCTATTTCTTCACCATTCAAGGAGAATCAAAACCAGGATAAGGGAAGCAATCTTGATACTGATCTTAATAAAACACCACAACCAAAACCAAGGAGAAGAAAGCACCGTCCCAAGGTCATCAAAGAAGGCAAACCCAAAAGAACTCGGAAGCCTGTTACCCCAAAGCCCGTTCAATCAAAAGGAAACCCAACTGTGAAGAGGAAATATGTGAGAAAGAATGCATTGACCAAGACTTCTATTCCTCCAACGGAAGTGACTAGCGAATTGACAAAAGAAATGCCTGAAACTGCCAAAACATCTTGTAGAAGGGTCATAAATTTTGACATGGGAGCAAAAGATGAAAGTTCTGCTGGCATAGAAAACATAACTGCACTATTGGGAAAAGAAAATGGTGTGAATGTAGGCCTTGCAGATGATCTGAACACTTCTGTGAAGCAGGCGTCAAACAGTTACACATCAATACCAGAAGACACACAAGCCCAAAATACATTTCCTTCGGGAAGAAAAGGCTCAGGGACAAAGCCAGCTGCAAAGAGGAAGTATGTGAGAAGGAAAGGAATGAGCATGACTTCTGCTCCTGCAGCAGAAATGACGAACGAGATGCCCCAGTCCACCCAAATGTCATGTACAGAGTTCAGAAATTTTGATGAAAGAACAAGAGATCAAAGCTGTGAAGTCAAAGAGCATGCAACAGTATGTACGGGTAGTGAAATTGGTGTAATCAGGCGGGAAATGAATGCAGGCCTAGCAAACTATTTAAACACTTCCATTATGCAGCCATCAAACGATTGCATGTTTTTAGCAGACGACTCACGAGCCCTAAATACATCTTCAGGAAGAAATAGCTCTGTGACAGGACTAGAGGAAAACTCAGCTGTTAAGAAGAATACAAGGAAAAAGGTGAATTCGACTTCTCCAACAGAAGTAGCTGGAGAAATGATTACAGAAAATGTTCCTGGATCAGCCCAAGATAATCCAATTGTCATTCCAGGCAATGAAATTGGTGTAGCCATGCAGGATACTAATGTAGGCTTTGCCTATGATCTAAACACTGCCATGAAGCTGGCATCAAACACTTATGTGTCATTACTAGAAGAAACACAAGCCACAAATACATCTTCAAGAAAAAAAAGATCTAGGACAAAGCCAGACGAAAACCCAACTGCCAAGAGGAAGTATGTGAGAAAGAAAAGGGTGATATCATCTGCTCCTTCAATTGAAGTACCAGGAGAATTGACTAGAGAAAAGATGTCTGCATCTGCCCAAACATTATGCACACAGTCCACAAATTTTGATGAAAGAGAAAGAGAAAAAACTTATGCAGTCGAAGAAAATTTAAGTGGACATCCAGACAGTGAAATTGGTGTAGTCATGCAGGAAATGAATGTAAGCCTTGCCTATGATTTAAACACTTCGATGAAGCAGACATTAAATGAAGATATGACATTACCTAAGGACTCACAAGCCCCAGGTCCATCTTCAAAAATCAATCTCCCTGGGATAAAGACAAAAGAAAACCTGGCCACCAAGAGGAAGAATGTGAGGAAAAAAGTATTGAATCCGTCTTCTATTCCTTCAGAAATGACGGGATTGACTGACGCAGTGATAGTTCACTCTAACAATATGTCATGGAGGCCTTCAAATCCTGACATGGGAACTAGAGATGTAAGGTCTGTAGGGAGAGAAAATTTACATTTGCACATGGGAAAGGAAAATGTGGTGTTAGAGGAAACAAAAGTAGGTCTCACCTGTAATCAAGACCCTTGGATGAATGCAACATTAACTAATTGCATGCCATTACCTGACGGAATGCAACAACTTGGTACATCTCCTGGGGCTACACATCTTAGTACATCCATTTCAAAATACACCCACCTTGGGGCAAAGCTAAATGACAACTCTGTAGCGAACAAAAACAAGGGACAGGCAACCGCTTGGGATGGAAACATCAGTAATAGTCAAAGTTCAACCATGAGGTTACAAATGGATGGTACAAAGAGGAAATATTCTGGTAACTTTAGTCATGCAGATGACAGCAGCATGAATCTGATTGGAGCACAGTATAATGGATTGTTCTCATACCAGTCTAGCTTTTACCTTCAGTTTCCAAACATACAGAAGAAAAGGAGAACTGAAAAGGGGAAAACTTCTGCCACGTACAACAAATCTGTGACTGCAACAAAAGAAGTCCAACAGGCATACCCTCAGGAAGGTGCTCCAGGACATCCTTATGCATCAAGCCCTAGCTGCTGGATTTATGGATCTGGATATAATACAACTGCGGTCCCAGTCATTGGTGAATCTGCTGAAAATTTTATTGATAATACTAGACCATTTAATGAGTTTGTCTTGTCTTTGAAAAGGCTGGCAGAAAGGTCCCAAACCTCTAATTGTGGTTCTGGTTCTCCTACCAGAATTAGAAACGGTGATACTGAACCAAATTATACTACAAAACAAGTAGGGATAGCTGCCAGAGAAACATTTGGAGATGCAAAAAGACCTCAAACATGCGTTGATGCTTTACTCGCAGATACACCTACATCACTTCCAAAAAAGAAGCGGAATAGAAAGAAGAAAGTCCTTTCCAGTTCAGCACATTCTAGCACAAACGAGATGCTACAGCACCATAATTTTACTTTGGGAAATTACCCTATGCCAGTGGGGAAGCCATCAGATGTTGCTTCCGAAGTACTGTGGAAGAGCATGAGCTATGTTGATGCATTAGCATTGCAGTTTAGACGACTAAACATAAACACAGAAGCCAGAGACCTTGCTTTTCAGCATAATGCACTTGTTCTGTATAAACAGCAAAATCAAAAGCAAAACAGCCTTATCTGTGGAGATGGGACCATTGTTCCCCTTCAAATCAAGAAACAGCAGCTACGACCAAAGGTTGACCTTGATGATGAGACTGATAGAGTCTGGAAGCTTTTGTTGCTTGATATAAACAGTCCTGGAATTGATGGAACAGATGAAGATAAGGCCAAATGGTGGGAAGAAGAGCGGAATGTGTTCCGAGGACGAGCAGACTCATTTATTGCACGGATGCATCTTGTACAAGGAGACAGACGATTTTCTCGATGGAAAGGATCAGTTGTGGATTCAGTGGTTGGAGTTTTCCTCACCCAGAATGTCTCTGACCATCTTTCCAGCTCTGCATTCATGTCCCTTGCTGCTCGATTTCCTAAAAATTTAAGCAGCATGTGCAAAGAACACCAGGACGAAGACACAGGGCTGGAACCACAAGTGCGTGTAGTGGAACCAGAAGAAGGGACTGAATGGAATGTAAAATTATTGAATCAATCTGTTAATGACCAGAGTTCTTTGACAACAGATATAGTTGAGCGTTCTGCAGAAAAAGAAGCCATCAACAGCAATGATTCCTGTGGAACGACCAGCAGTGTAATTAGTTTGTCAGATGAATCAAACTCCAGATTGTCAGTATCATCTCAACAAAATATTAAGGAACACTGTAGTCCAATGGGAAGTGGACTATATTGTTCCACAATTGAGGAAGGAGAAGAAAAATCATGTAATGGTGATAGGAAAGAGTTCATTGACATAGTTTCATCCCAAGGCTCTGTCATTTCATCCCAAATTTCTGGAGATTTTTCAAATGATCAAAATCCTGAGAAAATTGGATCATGTTCAGATAGCAACTCGGAAGTAGAAGTTCTATCGAAAACAGCAAAGTACAACCATTTTGATAGTAACACCTCTTTCAGTAAACTCCTTGAAATGGTTAGTTCAACCAAGTTTTATGAAGATAACAATCAGAAAAGCAAATCAAATCTGAACTTAAGAGATGCATATGATCAACCTTTATGCAGGCAGCATGACAACCCAAAAGAAAGCTTGCAAAAATCAAGTGTTACTCAAGGCTCTTCAGAAGCATCCATCAACCTCTCCCATGACTGCTTTGATCCTTTCGAAACCAAATCATCAAGTGACTTGATGAAAAGGGATGAAAATGGTATGAACAGATCTAGTTCACAAACAACAGAACCTGCCAGCCAAGTTGCAATTACTCTTTCTCAAACTATGGTGTCTCAAGTCCATCCTCAGGAACAAAGCAATCACCAGCAGCAAAGCTTTTTCAATTTCAACAGCCATGGACAAACTCAAGATCTTATGCAGAAAGAAAGAGGATCAGATCTTGGCAAGCACAAAAATGCCACGAATGGAACCAATGAGATAAGTTCTGCCCCAATAAAAACAAAGAGCAAGGGTCAAGGAAAAGATCAAAAGGATGATTTTAACTGGGATAGTTTAAGAATAGAAGCACAAGCTAAGGCTGGGAAAAGAGAAAAGACACAAAACACCATGGATTCTTTGGATTGGGATGCTGTGAGATGTGTAGATGTCAATGAAATTGCCCAGACCATCAAAGAACGGGGTATGAACAACAGGCTTGCAGAACGGATTCAGAATTTCCTGAATCGACTGGTTGAAGAACATGGAAGCATTGACCTTGAATGGCTAAGAGACGTTCCACCAGACAAAGCAAAAGAATACTTGCTCAGTGTAAAAGGATTGGGATTGAAAAGTGTGGAATGTGTGCGGCTTTTAACACTGCATCATCTTGCCTTCCCGGTAGACACAAATGTTGGACGAATAGCAGTTCGACTGGGGTGGGTACCTCTGCAGCCACTACCTGAATCACTGCAGTTGCATCTCCTGGAATTGTACCCAGTGTTGGAATCAATACAGAAATACCTCTGGCCCCGACTGTGCAAGCTAGATCAAAAAACACTATATGAGCTACATTATCAGATGATTACATTTGGAAAGGTGTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGCCCAATGAGAGGAGAATGTAGACATTTTGCAAGTGCATTTGCAAGTGCAAGGCTTGCACTGCCTGGACCAGAGCAGAAGAGTATAGTTAGCATAGCTGGAAATAGTGTGATTGACCAGAAGCCATCTGAAATCATCAGTCAGTTTCACTTGCCTCCCCCTGAGAACACAACCCAAGGAGAAGAAATTCAACTAACAGAAGTGTGCAGGACATTGGAATCAATATCAGAGATGAATATTTGTCACCCTATCATTGAAGAGCCAACAACTCCAGAGCCAGAATGCTCCAATGTATCACAAACTGATATAGAGGATGCTTTCTATGAGGATTCATGTGAAATTCCTACCATCAAGCTTAACATAGAAGAGTTCACTCTGAATTTACAAAATTACATGCAAGAAAAGATGGAACTTCAAGAAGGTGAAATGTCAAAGGCATTGATTGCTTTGAATCCAGAAGCTGCTTCAATTCCTATGCCCAAGCTAAAGAATGTGAGCCGATTACGAACAGAGCACTGTGTTTATGAACTCCCAGATACACATGCTCTTCTGCAAGGGTGGGACACACGAGAGCCTGATGACCCAGGGAAATACCTTCTTGCCATATGGACTCCAGGTGAAACAGCAAATTCTATACAGCCACCAGAAAGCAAATGCAGCTCCCGAGAAGAATATGGCCAACTCTGTAATGAAAAGGAATGTTTTTCATGCAACAGTTTCCGAGAAGCTAATTCACAGATAGTTAGAGGGACACTCCTGATACCATGTCGAACAGCTATGCGGGGAAGTTTTCCACTGAATGGCACCTATTTCCAGGTCAATGAGGTATTTGCTGATCATGAGTCCAGTCTTAACCCAATCAGTGTGCCCCGAAGTTGGATCTGGAACCTAAATAGACGAACAGTATATTTTGGAACCTCCGTACCAACAATATTTAAAGGTTTAACAACTCAAGAAATTCAACAATGCTTTTGGAGAGGTTATGTCTGCGTGCGGGGATTTGACAGGGAAACACGAGCACCCCGTCCTCTGATGGCTAGACTACATTTCCCAGCTAGCAAGTTGGCTAAGACCAAAGAGAAGACAGAAAAGGGATCGAGTTCCGCAAAATCACGAGGAATGAAATCAAATGTAGAACAGCCGGAATTGATTTCTAACAGTAGCAACTTTTAA 6642 0.4161 MEVAEMDGKEPQVEVPLVPATPIKPVPLKPVPIYTPGVINQMGYHANGAVACYEFSIGQEKLCRSDVGSNVAEVGSNVAGDSGNTCEHTASDAASSFSKLGFCDHLFAVEAESRNSSVTKGFNEGLNNSFVPSFILDNIRDPQETYIACCSNRISQDTPFTLDNANKESGQIASMQHMEENDSGGKERDGPTSTLDNNVLPSSKELCDPIMEFAAISSPFKENQNQDKGSNLDTDLNKTPQPKPRRRKHRPKVIKEGKPKRTRKPVTPKPVQSKGNPTVKRKYVRKNALTKTSIPPTEVTSELTKEMPETAKTSCRRVINFDMGAKDESSAGIENITALLGKENGVNVGLADDLNTSVKQASNSYTSIPEDTQAQNTFPSGRKGSGTKPAAKRKYVRRKGMSMTSAPAAEMTNEMPQSTQMSCTEFRNFDERTRDQSCEVKEHATVCTGSEIGVIRREMNAGLANYLNTSIMQPSNDCMFLADDSRALNTSSGRNSSVTGLEENSAVKKNTRKKVNSTSPTEVAGEMITENVPGSAQDNPIVIPGNEIGVAMQDTNVGFAYDLNTAMKLASNTYVSLLEETQATNTSSRKKRSRTKPDENPTAKRKYVRKKRVISSAPSIEVPGELTREKMSASAQTLCTQSTNFDEREREKTYAVEENLSGHPDSEIGVVMQEMNVSLAYDLNTSMKQTLNEDMTLPKDSQAPGPSSKINLPGIKTKENLATKRKNVRKKVLNPSSIPSEMTGLTDAVIVHSNNMSWRPSNPDMGTRDVRSVGRENLHLHMGKENVVLEETKVGLTCNQDPWMNATLTNCMPLPDGMQQLGTSPGATHLSTSISKYTHLGAKLNDNSVANKNKGQATAWDGNISNSQSSTMRLQMDGTKRKYSGNFSHADDSSMNLIGAQYNGLFSYQSSFYLQFPNIQKKRRTEKGKTSATYNKSVTATKEVQQAYPQEGAPGHPYASSPSCWIYGSGYNTTAVPVIGESAENFIDNTRPFNEFVLSLKRLAERSQTSNCGSGSPTRIRNGDTEPNYTTKQVGIAARETFGDAKRPQTCVDALLADTPTSLPKKKRNRKKKVLSSSAHSSTNEMLQHHNFTLGNYPMPVGKPSDVASEVLWKSMSYVDALALQFRRLNINTEARDLAFQHNALVLYKQQNQKQNSLICGDGTIVPLQIKKQQLRPKVDLDDETDRVWKLLLLDINSPGIDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPKNLSSMCKEHQDEDTGLEPQVRVVEPEEGTEWNVKLLNQSVNDQSSLTTDIVERSAEKEAINSNDSCGTTSSVISLSDESNSRLSVSSQQNIKEHCSPMGSGLYCSTIEEGEEKSCNGDRKEFIDIVSSQGSVISSQISGDFSNDQNPEKIGSCSDSNSEVEVLSKTAKYNHFDSNTSFSKLLEMVSSTKFYEDNNQKSKSNLNLRDAYDQPLCRQHDNPKESLQKSSVTQGSSEASINLSHDCFDPFETKSSSDLMKRDENGMNRSSSQTTEPASQVAITLSQTMVSQVHPQEQSNHQQQSFFNFNSHGQTQDLMQKERGSDLGKHKNATNGTNEISSAPIKTKSKGQGKDQKDDFNWDSLRIEAQAKAGKREKTQNTMDSLDWDAVRCVDVNEIAQTIKERGMNNRLAERIQNFLNRLVEEHGSIDLEWLRDVPPDKAKEYLLSVKGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQKSIVSIAGNSVIDQKPSEIISQFHLPPPENTTQGEEIQLTEVCRTLESISEMNICHPIIEEPTTPEPECSNVSQTDIEDAFYEDSCEIPTIKLNIEEFTLNLQNYMQEKMELQEGEMSKALIALNPEAASIPMPKLKNVSRLRTEHCVYELPDTHALLQGWDTREPDDPGKYLLAIWTPGETANSIQPPESKCSSREEYGQLCNEKECFSCNSFREANSQIVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHESSLNPISVPRSWIWNLNRRTVYFGTSVPTIFKGLTTQEIQQCFWRGYVCVRGFDRETRAPRPLMARLHFPASKLAKTKEKTEKGSSSAKSRGMKSNVEQPELISNSSNF 2213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00865 2213 MobiDBLite consensus disorder prediction 1489 1552 - -
Viun7g00865 2213 Gene3D Hypothetical protein; domain 2 1657 1741 - -
Viun7g00865 2213 Pfam Permuted single zf-CXXC unit 2038 2070 IPR028924 -
Viun7g00865 2213 SMART ccc3 1813 1833 IPR003651 GO:0051539
Viun7g00865 2213 MobiDBLite consensus disorder prediction 581 650 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 1337 1357 - -
Viun7g00865 2213 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 148 376 IPR044811 GO:0019104|GO:0035514|GO:0080111
Viun7g00865 2213 MobiDBLite consensus disorder prediction 1008 1029 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 490 521 - -
Viun7g00865 2213 FunFam DNA glycosylase/AP lyase ROS1 1734 1842 - -
Viun7g00865 2213 Pfam RRM in Demeter 2073 2173 IPR028925 -
Viun7g00865 2213 Gene3D - 1742 1830 IPR023170 -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 242 267 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 218 238 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 1603 1622 - -
Viun7g00865 2213 Coils Coil 1944 1964 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 2192 2213 - -
Viun7g00865 2213 SMART endo3end 1640 1812 IPR003265 GO:0006284
Viun7g00865 2213 CDD ENDO3c 1660 1778 IPR003265 GO:0006284
Viun7g00865 2213 MobiDBLite consensus disorder prediction 1599 1634 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 364 383 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 218 277 - -
Viun7g00865 2213 SUPERFAMILY DNA-glycosylase 1221 1835 IPR011257 GO:0003824|GO:0006281
Viun7g00865 2213 MobiDBLite consensus disorder prediction 1499 1516 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 1061 1085 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 585 605 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 1335 1357 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 364 419 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 177 202 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 2178 2213 - -
Viun7g00865 2213 MobiDBLite consensus disorder prediction 1524 1538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00865 Viun-Chr7 7865547 7878073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00865 - - pvu:PHAVU_007G223600g 3468.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00865 7 7865547 7878073 Viun7g00865 7 7865547 7878073 ECH
Viun1g02477 1 35101677 35109040 Viun7g00865 7 7865547 7878073 PCT