Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02477 ATGTGCTATAATCCTCACAGCAAAATAAATGAGCTGACAACAGAAGTGGCTGCTGTATCAGCACCACAAGAGGAGATAAGCCGGGGCATTGACCTGAATAAAACGCCTCAACCAAAACCAAAAACAAGAAAGCACCGGCCCAAGGTCATAAACGAAGGCCAACCAAAAAGAACAATCAAGAAAGCCGCTGCAGAAACTGTTCAATCTAAAAAAAACCGAGCTGACAAGAGGAAGCAAAGGAAAGGATTGAACACAGCTTCTACTCCACAAACAGAAGGGAGAGGAGATTGGACATCGGGGCCTGCATCAACCGCGAAGACATGTAATAGGTCCTTGAATTTTGAAAATACGCCCTTTGCCAATGCCAGCAGCTCAAGCAATTGGGTGGCTGATCATAATGGACTTCAAGAGTGTCCAAATAACTCCATTGGCAGAGACGGTTGGGGCAAAGGATGTGGATTACAAGCTCTCGGTTCTAAGAGAAAACAACCTGGTATTGAACAGGCAGATAATACCAGCATTAATCTGTTAGGAGCAGAACATAATGCTATGCAGGCATACTACCTGAACCTGAAGTATGAGGTTCAATTTCCAAATGTTCAGAAGAAAAGGAGAAGCGTCAAGGGGAGAATTTCCGAGGCACCACGTAAATCTTGCTGGGCCTCTGGTTCAGATTATACTGCAGCTGGAGTCCCAGTCTTGATTCAGGACAAACATCCCCTTCAGTACGCCTTATCCTTAGGGCAGAAGAGGCCGACCAAAAGCAGATCAAGAGCTTCTACAAGAACTCATGTTGATCTATCACATACTGCAAAGCAAACAGGTACCTCTGCTAGACGAACATTTGGTGATGTAGAAGGGCCACAGACATGCATTGATGCTTTATTTGCAGATATAGGACCATCACTACCAAAAAAGAAACGAACAGGAAAGAGAAGAAGTCCTGTCAATTCTGCATCCTCCTGCAAAAATGAAAGACAAGCCTGTGTAGAAGAATGGAAAAAATGGAAAAAAATTGTGGACGGTTTAACAGAGCAATTTACGTTCCTAAACATCAATAGAGAAGCCCAAGTGCTTGAAGCCCAAGAGCTTGAGTCGCATGGACAGCTTGTTCCTTATAACCAGCCAAATGGCACCATCGTTCCCTACAAACCCAAAAAGCAGAGCGTACGACCTAAAGTTTATCTTGATGAGGAAACAGCTAAAGTTTGGACGCTTTTACTTGAGGATAGTAATAGTAGTGGGATTGATGGAAGTGATGCAGAAAAGGCGATATGGTGGGAACAAGAACGAAAAGTGTTTCGGGGAAGGGCAGAGACATTCATTGCAAAGATGCATCGAGTACAAGGAGACAGGCGCTTTTCGATGTGGAAGGGATCTGTCGTGGATTCTGTGGTTGGAGTATTCCTCACTCAAAATGTATCAGACCACCTTTCGAGTTCTGCATTCATGGCACTTGCTTCTCGATTTCCTCTGAAGTCAACGAGTACATGCCACAAGGAGAGTACATGCCACAAGGAGAGCATGAGTTCGACAGACAATGAACTACCAGTTTGCACCGTGCATCCAGAAGGAAATGGAAACCGAGGTAATGAATCAGACAGCAAAATGTTTGAATCAGTTGAAAGACATAACAGTGAACATAGCCCAGTGGAAAGTGTAATGACTGAGGAAGGGTTACATGACTTTTCAACTGATCAAAATCCTGAAAAGATAGGATCATTCTCGGATAGCAACTCAGAAATAGAAGACCCGTTAAGCACTGCTCAGTTCAATATTTATAATAACAGGGCTTCATTCCTAGAGCTTTTAGAAATGGCAAGTTCAACCAAGTTGCCTGAAGTTAATGGGCAAAGAAGCAAAGCAACCGAGAGCTTTACAAAAACAAGTGATCAGCCCATAGACCTGAACTATGACAACCAGACAGGAAACTTGGAAAAATCAGACGCTACTCCATACACTTTAGAACCACCCATGACCAGTCAAACTCAAGAATCGAAGCAGAAAGAAAAGCAAAAAGACGTTGGTAGTCCCAACCATGAAAAGAGGAAAGGAAAGGGTAAAAAGCAATTAGCCTCAGAAAAGGGTAAGAAAAAATCTGCCTCGGCGGAACCAAAAAGCAAAAAGAAAGAAGAGAATAACTTTGATTGGGATAGTTTAAGAGTACAAGCACAAGCTCGGGCAGGGAAAAGAGAAAAGACAGAGAACACCATGGACTCTGTGGACTGGGATGCCGTGAGACGTGCTGACGTCAAAGAAATATCCAAAACAATCAAAGAAAGGGGCATGAACAACATGCTTGCTGACCGTATTCAGAGTTTCCTCAATCGATTGGTTGATAAGCACGAGGGCATCGATCTTGAGTGGCTGAGAGACGTTCCACCTGACCAAGCAAAAAAGTTCTTGCTCAGCATAAAGGGACTGGGATTGAAAAGTGTGGAGTGTGTTAGACTCTTAACACTGCACCATCTTGCATTTCCGGTGGACACAAATGTTGGACGCATAGCGGTACGTTTGGGATGGGTACCTCTCCAGCCGCTGCCAGAGTCACTACAGTTGCATCTTCTAGAATTGTACCCAGTGTTGGATGCTGTACAAAAATATCTCTGGCCTCGACTCTGCAAGCTAGACCAAAGAACATTGTATGAGCTGCACTACCAGTTGATCACATTTGGAAAGGTTTTCTGTACTAAAAGCAAACCGAATTGCAACGCATGCCCGATGAGAGGGGAATGCAGACACTTTGCAAGCGCCTTTGCAAGTGCAAGACTTGCCCTGCCAGCACCAGAGGAGAACAGAATGGTGGCCACATCCGGAGACAATGCAACCGAGGGGAAGCAATCACAAGTTATAAATCAGATGCCCTTGCTTCTCCCTGAAAATCCAATTGAAGAGGCACTTCAACAAAACCAAATGATCATTCACCCTCTAGTTGAAGAACCAGCAAGTCCAAAGCCTGAACGTTCACAACCGTCACGAGTTGTTGATATAGAGGACGCCTTCAAAAAGGATTCATTTGAAATTCCAAACATAGAAGTAGACATGGAAGTGTTCAATTTGAGTCTACGAAACTATGTGCAACAAAATATGGAACTTCAAAAAGGGGAAATGTCAAAGGCCTTGGTTGCTTTAAATCCGGATGAGGCATGCATACCTACACCCAAACTCATCGGGCCTCCGCCCTCAGTAGCGGAAGCCGGAACCGTGACCTGCCTAATGAATTAG 3225 0.4425 MCYNPHSKINELTTEVAAVSAPQEEISRGIDLNKTPQPKPKTRKHRPKVINEGQPKRTIKKAAAETVQSKKNRADKRKQRKGLNTASTPQTEGRGDWTSGPASTAKTCNRSLNFENTPFANASSSSNWVADHNGLQECPNNSIGRDGWGKGCGLQALGSKRKQPGIEQADNTSINLLGAEHNAMQAYYLNLKYEVQFPNVQKKRRSVKGRISEAPRKSCWASGSDYTAAGVPVLIQDKHPLQYALSLGQKRPTKSRSRASTRTHVDLSHTAKQTGTSARRTFGDVEGPQTCIDALFADIGPSLPKKKRTGKRRSPVNSASSCKNERQACVEEWKKWKKIVDGLTEQFTFLNINREAQVLEAQELESHGQLVPYNQPNGTIVPYKPKKQSVRPKVYLDEETAKVWTLLLEDSNSSGIDGSDAEKAIWWEQERKVFRGRAETFIAKMHRVQGDRRFSMWKGSVVDSVVGVFLTQNVSDHLSSSAFMALASRFPLKSTSTCHKESTCHKESMSSTDNELPVCTVHPEGNGNRGNESDSKMFESVERHNSEHSPVESVMTEEGLHDFSTDQNPEKIGSFSDSNSEIEDPLSTAQFNIYNNRASFLELLEMASSTKLPEVNGQRSKATESFTKTSDQPIDLNYDNQTGNLEKSDATPYTLEPPMTSQTQESKQKEKQKDVGSPNHEKRKGKGKKQLASEKGKKKSASAEPKSKKKEENNFDWDSLRVQAQARAGKREKTENTMDSVDWDAVRRADVKEISKTIKERGMNNMLADRIQSFLNRLVDKHEGIDLEWLRDVPPDQAKKFLLSIKGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLDAVQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPAPEENRMVATSGDNATEGKQSQVINQMPLLLPENPIEEALQQNQMIIHPLVEEPASPKPERSQPSRVVDIEDAFKKDSFEIPNIEVDMEVFNLSLRNYVQQNMELQKGEMSKALVALNPDEACIPTPKLIGPPPSVAEAGTVTCLMN 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02477 1074 MobiDBLite consensus disorder prediction 18 104 - -
Viun1g02477 1074 MobiDBLite consensus disorder prediction 612 665 - -
Viun1g02477 1074 MobiDBLite consensus disorder prediction 266 280 - -
Viun1g02477 1074 MobiDBLite consensus disorder prediction 47 72 - -
Viun1g02477 1074 MobiDBLite consensus disorder prediction 567 581 - -
Viun1g02477 1074 SMART ccc3 895 915 IPR003651 GO:0051539
Viun1g02477 1074 Gene3D Hypothetical protein; domain 2 736 823 - -
Viun1g02477 1074 MobiDBLite consensus disorder prediction 612 720 - -
Viun1g02477 1074 SMART endo3end 720 894 IPR003265 GO:0006284
Viun1g02477 1074 MobiDBLite consensus disorder prediction 249 283 - -
Viun1g02477 1074 MobiDBLite consensus disorder prediction 83 104 - -
Viun1g02477 1074 Gene3D - 824 912 IPR023170 -
Viun1g02477 1074 MobiDBLite consensus disorder prediction 562 581 - -
Viun1g02477 1074 MobiDBLite consensus disorder prediction 694 717 - -
Viun1g02477 1074 FunFam DNA glycosylase/AP lyase ROS1 816 924 - -
Viun1g02477 1074 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 11 1057 IPR044811 GO:0019104|GO:0035514|GO:0080111
Viun1g02477 1074 MobiDBLite consensus disorder prediction 666 681 - -
Viun1g02477 1074 SUPERFAMILY DNA-glycosylase 436 917 IPR011257 GO:0003824|GO:0006281
Viun1g02477 1074 CDD ENDO3c 742 860 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02477 Viun-Chr1 35101677 35109040 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02477 - - vun:114185397 2075.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02477 1 35101677 35109040 Viun1g02477 1 35101677 35109040 ECH
Viun1g02477 1 35101677 35109040 Viun7g00865 7 7865547 7878073 PCT