Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00844 ATGAGTAGCGGAAAATGGAGCTGTTCATGGTGGATTTCATCGGAGGAATTCCAAATGATGAAGCTGGTGATACTGATAGTGCCTCTGTTCGTGCTTACATGGATTGCTACTGCAAAAACTTCACACATTTGCCGATGGAGTTTGGTTGCAAATTGTTATGTGGATGATGATACCACACCTTCTCCTCCTCCTCCGTCTCAATTTAATGAAACCCAAGTTTTCAATGTCTCCAAACCTTATGTGGAGGAAACTAGTGAACCACACCTACTACTGAAGCAAACCACAAAGTCAAACATCTTAGAAAAAACCGAAGTTGGTTTGGCACAAGCTCGTGCTGCAATCAGAGAAGTCAGAAATGAGAATTATCCAACACTAGATTCAGATTATGTTCCCATGGGTCCAGTGTATCTGAATCCTAAGACATTTCACAGGAGCTACTTAGAAATGGAGAAACAGTTCAAAGTCTTTGTGTATGGAGAAGGGGAGCCTCAAATCTTCCGCAATCCACCATGCAAAAGGGTATACTCCATGGAGGATAACTTCATGCATTCTATTGCAATGAATGACCATTTTCGAACCAAAGATCCAGAGAAAGCACATGTGTTTTTCCTCCCTTTTAGTGTAGTAACCAATCTTCGATATGGGTATGAAAGAGTCTCACAAGATTCTAGTGCTGAAAGAAACACTGTGACAGATTATATCAGTGTCATTGCTGCAAGATATCCTTATTGGAATCGAAGTCTTGGAGCAGATCACTTCACCCTTTCTTGCCATGACATGTGCCGAAGGACATCATTATCCTCACCTGATCCGCTCAAGAACTCCATTCGTGTGCTTTGTAATGCCAATACATCTGAAGGATTTAAGCCAACAAAAGATGTTTCATTTCCTGAAATTAATCTCAAGACTGGTTCAACAAACAGTTTCATTGGTGGGCCATCTGCATTTAAACGTTCAGTTCTGGCTTTCTTTGCTGGGGGAGTTCATGGCCCCATTAGACCAGTTCTTCTCAAGCACTGGGAGAACAAGGATGAAGATATTCAGGTTCACGAGTATCTCCAAAAGGGTACTTCTTACCATGAGATGATGAGAAAGAGCAAGTTTTGCCTTTGTCCTAGTGGGAATGAGGTGGCTAGCCCTAGAGTGGTGGAGGCAATTTACACTGGGTGTGTTCCTGTGATCATTTCCGACCACTATGTTCCTCCTTTCAGTGATGTTTTGAACTGGAAGTCATTTTCAGTCCAGCTTTCAGCTAAGGACATTCCCAACCTGAAGGACATCTTGATGAGTATTTCTCCAAGACAATATGTGAGAATGCAGAGAGGAGTGGAACAAATTCGAAAGCACTTTGAAGTACATTCTCCACCCAAGCGATTCGATGTGTTTCACATGATCCTTCATTCTGTGTGGCTTAAGAGACTCAACTTCGAAGTTCACGATGATCACACGGCCTTGGTTCAGTAA 1464 0.4235 MSSGKWSCSWWISSEEFQMMKLVILIVPLFVLTWIATAKTSHICRWSLVANCYVDDDTTPSPPPPSQFNETQVFNVSKPYVEETSEPHLLLKQTTKSNILEKTEVGLAQARAAIREVRNENYPTLDSDYVPMGPVYLNPKTFHRSYLEMEKQFKVFVYGEGEPQIFRNPPCKRVYSMEDNFMHSIAMNDHFRTKDPEKAHVFFLPFSVVTNLRYGYERVSQDSSAERNTVTDYISVIAARYPYWNRSLGADHFTLSCHDMCRRTSLSSPDPLKNSIRVLCNANTSEGFKPTKDVSFPEINLKTGSTNSFIGGPSAFKRSVLAFFAGGVHGPIRPVLLKHWENKDEDIQVHEYLQKGTSYHEMMRKSKFCLCPSGNEVASPRVVEAIYTGCVPVIISDHYVPPFSDVLNWKSFSVQLSAKDIPNLKDILMSISPRQYVRMQRGVEQIRKHFEVHSPPKRFDVFHMILHSVWLKRLNFEVHDDHTALVQ 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00844 487 Pfam Exostosin family 150 431 IPR040911 -
Viun7g00844 487 Coils Coil 100 120 - -
Viun7g00844 487 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 44 469 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00844 Viun-Chr7 7518223 7521298 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00844 - - vun:114190677 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00844 7 7518223 7521298 Viun7g00844 7 7518223 7521298 ECH
Viun1g02455 1 34931777 34935083 Viun7g00844 7 7518223 7521298 PCT