Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02455 ATGGCTACGGCTGTTACATGGAGTTCAGGGGCATCTTCCTCCACCAAGCTCTTTCTCTTCATGGTGCCTCTCGTGCTTGTTGCAGCGCTGGTTTCTGTTCTGGGTCCTAGCCCTTCTACTTGGTTGTCCACTGCGAAGCCACCGGTGTTATTGTTGAGCTCTGTTACTTCCTCGGCTGGTACTAGTAGTGGCGCTGTGACCACCCCTTCTGAGGTTAAGCAGAGAGAAGAGTTGGTGGTGCTGCCCGTGGATAATCGTGCCGGAGAGAATCTTCTCTCCGATCACGCTCACTTCAATCTCTCCACTACTCCTCCATTTTCTGTTCAGGCCATACAAACACCTCAACATCATAACAGGGATGAACAAAACGTTACGCAAAATTTGGAAAACGTGAGTTCCGTGAACGAGTCTTATGTTCCAGCAGAGAGGCCAAAACTGCAAAGAAAATTCAGCATCTTAGACAGAACTGAAGCAGGTCTGATAAAAGCTCGAGCTGCAATTAGAGAAGCAAGAAACGGAAACCAAACTCAAGATACAGACTACGTTCCTATTGGACCAATGTACATGAATGCCAATGCATTTCACAGGAGTTACTTGGAAATGGAGAAACAGCTGAAAGTGTATGTGTACGAGGAAGGGGAAGCTCCAGTTTTTCATAATGGGCCTTGCAAGAGCATATACTCGATGGAGGGGAATTTCATCCATGGGATTGAGATGAATGAGAAATTCCGAACAAGAGATCCTGAGAAAGCACATGTTTTTTTCTTACCTTTTAGTGTAGCAATGTTGGTCCAATTCGTGTATGTACGAGACTCTCATGACTTTGGCCCCATAAAGAAAACTGTCACAGACTACATCAACGTCATCTCAGAAAGATACCCTTATTGGAACAGAAGCCTTGGTGCTGATCATTTCTATCTTGCGTGCCACGATTGGGGGCCAGAGACTTCGCGTTCGGTTCCTAACCTGCGAGATAATTCGATACGTGTGTTGTGCAATGCTAACACTTCTGAGGGATTCAAGCCTTCCAAGGATGTCTCTTTGCCGGAAATTAACCTCCAGAGTGGTTCCATAAACGGTTTGATCGGTGGGCCGTCTGCCTCGAAGCGTCCACTCTTGGCCTTCTTTGCTGGTGGGCTTCACGGCCCAGTTAGGCCCGTTCTTCTTGAACACTGGGAAAACAAGGACGAGGACATGAAGGTTCAGAAGTACCTTCCGAAGGGTGTGTCGTACTATGAGATGCTGAGGAAGAGCAGGTTCTGTCTTTGTCCCAGTGGGTACGAGGTGGCGAGTCCGAGAGTGGTGGAGGCAATCTACACAGGGTGTGTCCCAGTTCTGATTTCGGATCACTATGTTCCTCCTTTCAGTGATGTTTTGAACTGGAAGTCGTTTTCCGTTGAGGTTTCGGTTGAGGAGATTCCGAAATTGAAGGAAATTTTGTTGAGTATATCTCCAAGACAGTATATAAGAATGCAGAGGAGAGTGGTACAAGTTAGGAGGCACTTTGAGGTGCACTCTCCCCCCAAGAGATTCGATGTCTTTCACATGATCCTTCATTCTGTATGGCTTAGAAGATTGAACTTTAGAGTCCACGATCGTCAATCACAACTGTTTTAG 1617 0.4675 MATAVTWSSGASSSTKLFLFMVPLVLVAALVSVLGPSPSTWLSTAKPPVLLLSSVTSSAGTSSGAVTTPSEVKQREELVVLPVDNRAGENLLSDHAHFNLSTTPPFSVQAIQTPQHHNRDEQNVTQNLENVSSVNESYVPAERPKLQRKFSILDRTEAGLIKARAAIREARNGNQTQDTDYVPIGPMYMNANAFHRSYLEMEKQLKVYVYEEGEAPVFHNGPCKSIYSMEGNFIHGIEMNEKFRTRDPEKAHVFFLPFSVAMLVQFVYVRDSHDFGPIKKTVTDYINVISERYPYWNRSLGADHFYLACHDWGPETSRSVPNLRDNSIRVLCNANTSEGFKPSKDVSLPEINLQSGSINGLIGGPSASKRPLLAFFAGGLHGPVRPVLLEHWENKDEDMKVQKYLPKGVSYYEMLRKSRFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSVEEIPKLKEILLSISPRQYIRMQRRVVQVRRHFEVHSPPKRFDVFHMILHSVWLRRLNFRVHDRQSQLF 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02455 538 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 34 521 IPR004263 GO:0006486|GO:0016757
Viun1g02455 538 Pfam Exostosin family 202 481 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02455 Viun-Chr1 34931777 34935083 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02455 - - gmx:100806278 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02455 1 34931777 34935083 Viun1g02455 1 34931777 34935083 ECH
Viun1g02455 1 34931777 34935083 Viun7g00844 7 7518223 7521298 PCT