Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00482 ATGGGTTCTGAAGAACAACATCCTATGATTCCTGTTCTAGATTTCAGCATGGAAGATTCGAAGCCAGGGAGCGATTCCTGGTTAGAAAGATGCAGAAGTGTGAGGCAAGCACTTGAAGAACATGGATGTTTTGTAGCTGTGTATGATAAAGCTTGTGAAGAGCTCGAAAATGGTGTTTTCTGCTCCATGAAGGAGCTTTTCGATCTCTCACATGAAACCAAACAAAGAAACACATATGAGGGTTCACCATTGAAAGGCTACGTAGGACAACTCCCACAGATTCCCCTCCACCAAAGCATGGGAATAGATGAGGGAACAACCCTAGAGGGAATTCAAAGTTTTGCCCACAAAATGTGGCCAAAAGGCAATCATCAATTTTGTAAATATATATTTGAGTATGCAAAGGTAGCAGAAGAATTGGATCGTATGGTGGCCAGAATGATATTTGAAAGTTATGGTCTTTCAGAGTACTATGACTCATACATTGGCTCTACAAGTTATCTACTTAGGCTTTTGGCACACACAGCACCAGAAAAGGTTGAGCCTCAACTGGGTCTTGTGGCTCACACAGACAAGAGCTTCACCACAATTCTTCACCAAAATCATGTCAATGCACTCATGGTGGAGACAAGGAATGGTGCCTGGATTCATGTTGATTTCTCTTCAACATCTTCCTTTGTCGTCATGGCTGGTGATGGACTCATGGCTTGGAGCAATGACAGAATACAGTCCCCTAATCATAAGGTTGTGATGAATGGGAATGAAACAAGGTACTCTCTTGGTCTGTTTGCATTCTCCAAAGGAATTCTGAAAGTGCCTGAAGAGCTTATTGATGAAGAACACCCAGTGCAGTATAAGCCCTTTCATCATCTTGGATTGCTAAACTTCACTTACAGTGCTAATATGAAAGCTTATTGTGGTGTGTGA 927 0.4207 MGSEEQHPMIPVLDFSMEDSKPGSDSWLERCRSVRQALEEHGCFVAVYDKACEELENGVFCSMKELFDLSHETKQRNTYEGSPLKGYVGQLPQIPLHQSMGIDEGTTLEGIQSFAHKMWPKGNHQFCKYIFEYAKVAEELDRMVARMIFESYGLSEYYDSYIGSTSYLLRLLAHTAPEKVEPQLGLVAHTDKSFTTILHQNHVNALMVETRNGAWIHVDFSSTSSFVVMAGDGLMAWSNDRIQSPNHKVVMNGNETRYSLGLFAFSKGILKVPEELIDEEHPVQYKPFHHLGLLNFTYSANMKAYCGV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00482 308 Gene3D - 2 301 IPR027443 -
Viun7g00482 308 MobiDBLite consensus disorder prediction 1 20 - -
Viun7g00482 308 SUPERFAMILY Clavaminate synthase-like 9 302 - -
Viun7g00482 308 Pfam 2OG-Fe(II) oxygenase superfamily 172 265 IPR044861 -
Viun7g00482 308 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 290 - -
Viun7g00482 308 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 302 - -
Viun7g00482 308 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 89 IPR026992 -
Viun7g00482 308 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 266 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00482 Viun-Chr7 3649459 3652093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00482 130 286 Glycosyltransferase AT5G59530 28.485 2.63e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00482 - - vum:124839683 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00482 7 3649459 3652093 Viun1g01652 1 28330466 28331904 PCT